Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670205.1_202016-06- 20] 17 sequences; 12,126,581 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq12 693 0.0 >seq12 Length=1077536 Score = 693 bits (768), Expect = 0.0 Identities = 460/508 (91%), Gaps = 6/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| | | |||||||||| |||||||||||||| ||| Sbjct 456942 GTACTCATTCCAATTACAAGACCCGANTGGGCCCTGTATCGTTATTTATTGTCACTNCCT 457001 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | | ||||||||||||||| || |||||| || |||| |||||||||||||||| Sbjct 457002 CCCTGAATTAGGATTGGGTAATTTGNGCNCCTGCTNCCNTCCTNGGATGTGGTAGCCGTT 457061 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||| |||| |||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 457062 TCTCAGGCNCCCTNTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 457121 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 457122 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 457181 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| | Sbjct 457182 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGAT 457239 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||| | ||||| || |||| | |||| |||||||||||||||| Sbjct 457240 TTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCT 457299 Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct 457300 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 457359 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||| Sbjct 457360 ATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATNCNTGGCTTAATC 457419 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 457420 TTTGAGACAAGCATATGACTACTGGCAG 457447 Score = 636 bits (704), Expect = 5e-180 Identities = 444/508 (87%), Gaps = 6/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| |||||||| || | ||| Sbjct 466079 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTNTCNCNNCCT 466138 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | | ||||| || |||||||| ||||||| |||||||||| || |||||||||| Sbjct 466139 CCCTGAATTAGGATTNGGNAATTTGCGNGCCTGCTNCCTTCCTTGGNTGNGGTAGCCGTT 466198 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||| ||||||||||||||||| ||||| |||||||||| ||| ||| |||||||| Sbjct 466199 TCTCANGCTCCCTCTCCGGAATCNNACCCTTATTCCCCGTTNNCCGNTGAAACCATGGTN 466258 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||| ||||| |||| |||||||||||||||||||||||||||||| || Sbjct 466259 GGCCACTATCCTACNATCGANAGTTNATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 466318 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | || | Sbjct 466319 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-NCCGAA-GACANTGAT 466376 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||| | ||||| || |||| | |||| |||||||||||||||| Sbjct 466377 TTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCT 466436 Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct 466437 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 466496 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||| |||||||||||| || |||| ||||||||||| ||||||| ||||||| Sbjct 466497 ATGAGCCATTCNCAGTTTCACTGTNTAAATTGNTTATACTTAGANATGCATGNCTTAATC 466556 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 || ||||||||||||||||||||||||| Sbjct 466557 TTNGAGACAAGCATATGACTACTGGCAG 466584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399743232