Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670235.1_202016-06-
20] 17 sequences; 12,121,746 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 343 6e-92
>seq12
Length=1075190
Score = 343 bits (380), Expect = 6e-92
Identities = 419/579 (72%), Gaps = 15/579 (3%)
Strand=Plus/Minus
Query 33 CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAA 92
|||||| ||| | ||||||| | ||| || |||| | | | || | | ||||||
Sbjct 454589 CTTCGAAGAGNNGNGTTGTTTNGNAATNNNGCNCTAAGNGNGNGNTANNNTCCATCTAAA 454530
Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152
|||| | ||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||
Sbjct 454529 GCTANANATTGGNGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAAC 454470
Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC 212
|||| |||||||| |||||| ||||||||||||||||||||||| || | | |||||
Sbjct 454469 TTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGAC 454410
Query 213 TTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGC 267
|| ||| | | || ||| | | | | | ||| | ||| |||
Sbjct 454409 ATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGC 454353
Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327
||||||||| | || || ||||||| || ||||||| || | |||| || |
Sbjct 454352 CAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTAT 454294
Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATG 385
||||||| | || |||| | ||| || ||||||||| | ||| | | | ||||||
Sbjct 454293 TATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATG 454236
Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445
||||| |||||||| || || |||||||||| |||||||||||||||||||||| |||||
Sbjct 454235 CTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTAT 454176
Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCG 504
|||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | ||
Sbjct 454175 GCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCG 454116
Query 505 TGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGC 563
|| || |||| ||||||||||||||||| |||| | || |||| || ||
Sbjct 454115 CAAGAGGNGCACAATCGACCGATCCTGATGNNTTCGNANNNNNTTNAGTANGANNNTANN 454056
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGG 602
| | | ||| ||| | || | | ||||||||
Sbjct 454055 TNNNNNNNCNNGNAAGNTGGNNANCTNTNCNTGAATAGG 454017
Score = 325 bits (360), Expect = 2e-86
Identities = 385/522 (74%), Gaps = 15/522 (3%)
Strand=Plus/Minus
Query 44 CGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTG 103
||| |||||||| | | ||| || | || | | | || |||||||||||||
Sbjct 463715 CGANNTGTTTGGGNANGNNNNNCTANNTGNGNGGNANNNTCCANCTNAAGCTAAATATTG 463656
Query 104 GCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAG 163
|| || ||||||||||| ||||||| |||||| ||||||||||||| |||||| ||||||
Sbjct 463655 GCGAGNGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAG 463596
Query 164 AGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGT 223
|| |||||| ||||||||||||||||||||||| || | | ||||| ||
Sbjct 463595 AGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTG 463536
Query 224 TGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCT 278
||| | | || ||| | | | | | ||| | ||| |||||||||||| |
Sbjct 463535 TGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTT 463479
Query 279 CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGG 338
|| || ||||||| || ||||||| || | |||| || |||||||| | |
Sbjct 463478 TTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTG 463420
Query 339 GTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATG 396
| |||| | ||| || ||||||||| | ||| | | | ||||||||||| |||||
Sbjct 463419 G--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATG 463362
Query 397 GTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTG 456
||| || || |||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 463361 GTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTG 463302
Query 457 GGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCA 514
||||| |||||| | ||||||||||||||||||| ||| |||| | || || || |||
Sbjct 463301 GGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCA 463242
Query 515 CCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556
| |||| ||| | || ||||||||| ||||| ||||||
Sbjct 463241 CAATCGNCCGNTNCTNNNNTCTTCGGATNNATTTGNGTAAGA 463200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |