Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670235.1_202016-06- 20] 17 sequences; 12,121,746 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 343 6e-92 >seq12 Length=1075190 Score = 343 bits (380), Expect = 6e-92 Identities = 419/579 (72%), Gaps = 15/579 (3%) Strand=Plus/Minus Query 33 CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAA 92 |||||| ||| | ||||||| | ||| || |||| | | | || | | |||||| Sbjct 454589 CTTCGAAGAGNNGNGTTGTTTNGNAATNNNGCNCTAAGNGNGNGNTANNNTCCATCTAAA 454530 Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152 |||| | ||||| |||||||||||||| ||||||| |||||| ||||||||||||| || Sbjct 454529 GCTANANATTGGNGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAAC 454470 Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC 212 |||| |||||||| |||||| ||||||||||||||||||||||| || | | ||||| Sbjct 454469 TTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGAC 454410 Query 213 TTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGC 267 || ||| | | || ||| | | | | | ||| | ||| ||| Sbjct 454409 ATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGC 454353 Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327 ||||||||| | || || ||||||| || ||||||| || | |||| || | Sbjct 454352 CAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTAT 454294 Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATG 385 ||||||| | || |||| | ||| || ||||||||| | ||| | | | |||||| Sbjct 454293 TATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATG 454236 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 ||||| |||||||| || || |||||||||| |||||||||||||||||||||| ||||| Sbjct 454235 CTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTAT 454176 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCG 504 |||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | || Sbjct 454175 GCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCG 454116 Query 505 TGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGC 563 || || |||| ||||||||||||||||| |||| | || |||| || || Sbjct 454115 CAAGAGGNGCACAATCGACCGATCCTGATGNNTTCGNANNNNNTTNAGTANGANNNTANN 454056 Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGG 602 | | | ||| ||| | || | | |||||||| Sbjct 454055 TNNNNNNNCNNGNAAGNTGGNNANCTNTNCNTGAATAGG 454017 Score = 325 bits (360), Expect = 2e-86 Identities = 385/522 (74%), Gaps = 15/522 (3%) Strand=Plus/Minus Query 44 CGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTG 103 ||| |||||||| | | ||| || | || | | | || ||||||||||||| Sbjct 463715 CGANNTGTTTGGGNANGNNNNNCTANNTGNGNGGNANNNTCCANCTNAAGCTAAATATTG 463656 Query 104 GCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAG 163 || || ||||||||||| ||||||| |||||| ||||||||||||| |||||| |||||| Sbjct 463655 GCGAGNGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAG 463596 Query 164 AGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGT 223 || |||||| ||||||||||||||||||||||| || | | ||||| || Sbjct 463595 AGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTG 463536 Query 224 TGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCT 278 ||| | | || ||| | | | | | ||| | ||| |||||||||||| | Sbjct 463535 TGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTT 463479 Query 279 CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGG 338 || || ||||||| || ||||||| || | |||| || |||||||| | | Sbjct 463478 TTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTG 463420 Query 339 GTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATG 396 | |||| | ||| || ||||||||| | ||| | | | ||||||||||| ||||| Sbjct 463419 G--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATG 463362 Query 397 GTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTG 456 ||| || || |||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct 463361 GTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTG 463302 Query 457 GGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCA 514 ||||| |||||| | ||||||||||||||||||| ||| |||| | || || || ||| Sbjct 463301 GGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCA 463242 Query 515 CCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556 | |||| ||| | || ||||||||| ||||| |||||| Sbjct 463241 CAATCGNCCGNTNCTNNNNTCTTCGGATNNATTTGNGTAAGA 463200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350