Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670265.1_202016-06-
20] 17 sequences; 12,117,423 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 423 8e-116
>seq12
Length=1077577
Score = 423 bits (468), Expect = 8e-116
Identities = 447/592 (76%), Gaps = 15/592 (3%)
Strand=Plus/Minus
Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91
||| || || ||| | | || ||| ||| ||| || | | || | |||||
Sbjct 463762 CCTNCGNAGANNCGANNTNTNTGNNAATNCAGNNCTANGNGGNNNGNANATNCCNTCTAA 463703
Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151
|| |||| ||| | |||| ||||||||| ||||||| |||||| ||||||||||||| |
Sbjct 463702 AGNNAAATNTTGNCNAGAGNCCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAA 463643
Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGA 211
||||| |||||||| |||||| ||||||||||||||||||||||| || | | ||||
Sbjct 463642 CTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGA 463583
Query 212 CTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GG 266
| || ||| | | || ||| | | | | | ||| | ||| ||
Sbjct 463582 CATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGG 463526
Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326
|||||||||| | || || ||||||| || ||||||| || | |||| ||
Sbjct 463525 CCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTA 463467
Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGAT 384
|||||||| | || |||| | ||| || ||||||||| | ||| | | | |||||
Sbjct 463466 TTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGAT 463409
Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444
|||||| |||||||| || || |||||||||| |||||||||||||||||||||| ||||
Sbjct 463408 GCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTA 463349
Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCC 503
||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | |
Sbjct 463348 TGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTC 463289
Query 504 GTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562
| || || |||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 463288 GCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGNAAGAGCATAG 463229
Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||||| |||||||| ||| |||||||||| || | ||| ||||| | ||
Sbjct 463228 CTGTTGGGNCCCGAAAGNTGGNGAACTATGCCNGANTNGGGNGAAGCNANAG 463177
Score = 396 bits (438), Expect = 1e-107
Identities = 431/575 (75%), Gaps = 15/575 (3%)
Strand=Plus/Minus
Query 52 TTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGA 111
||||||||| | | || || || || | || || || |||||||| |||||
Sbjct 454605 TTGGGAATGNANCNNNNNGTGNNNGGNAANTTNCATCNAANGCNNNATATTGGCGAGAGA 454546
Query 112 CCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAA 171
||||||| | ||||||| |||||| ||||||||||||| |||||| |||||||| ||||
Sbjct 454545 CCGATAGNGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGAAAA 454486
Query 172 AGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAAC 231
|| ||||||||||||||||||||||| || | | ||||| || ||| |
Sbjct 454485 AGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT-- 454428
Query 232 CGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCGGT 286
| || ||| | | | | | ||| | ||| |||||||||||| | || ||
Sbjct 454427 CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTGGC 454369
Query 287 CGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATG 346
||||||| || ||||||| || | |||| || |||||||| | || ||||
Sbjct 454368 AGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAATA 454312
Query 347 CGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAG 404
| ||| || ||||||||| | ||| | | | ||||||||||| |||||||| || |
Sbjct 454311 CTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATATG 454252
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464
| |||||||||| |||||||||||||||||||||| |||||||||||||||||| || ||
Sbjct 454251 CCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGNGTAAA 454192
Query 465 ACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCGAC 522
|||| | ||||||||||||||||||| ||| |||| | || || || || | ||||||
Sbjct 454191 ACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCNCAATCGAC 454132
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
|||||||| ||| ||||| || |||||| ||| ||| ||||||||||||||||||||
Sbjct 454131 CGATCCTGNTGTNNTCGGANGGNTTTGAGNAAGNNCATNNCTGTTGGGACCCGAAAGATG 454072
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
|||||||||||| |||||| ||||| ||| |||
Sbjct 454071 NNGAACTATGCCTGNATAGGGNGAAGCNAGANGAA 454037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |