Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670265.1_202016-06- 20] 17 sequences; 12,117,423 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 423 8e-116 >seq12 Length=1077577 Score = 423 bits (468), Expect = 8e-116 Identities = 447/592 (76%), Gaps = 15/592 (3%) Strand=Plus/Minus Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91 ||| || || ||| | | || ||| ||| ||| || | | || | ||||| Sbjct 463762 CCTNCGNAGANNCGANNTNTNTGNNAATNCAGNNCTANGNGGNNNGNANATNCCNTCTAA 463703 Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151 || |||| ||| | |||| ||||||||| ||||||| |||||| ||||||||||||| | Sbjct 463702 AGNNAAATNTTGNCNAGAGNCCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAA 463643 Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGA 211 ||||| |||||||| |||||| ||||||||||||||||||||||| || | | |||| Sbjct 463642 CTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGA 463583 Query 212 CTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GG 266 | || ||| | | || ||| | | | | | ||| | ||| || Sbjct 463582 CATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGG 463526 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 |||||||||| | || || ||||||| || ||||||| || | |||| || Sbjct 463525 CCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTA 463467 Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGAT 384 |||||||| | || |||| | ||| || ||||||||| | ||| | | | ||||| Sbjct 463466 TTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGAT 463409 Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444 |||||| |||||||| || || |||||||||| |||||||||||||||||||||| |||| Sbjct 463408 GCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTA 463349 Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCC 503 ||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | | Sbjct 463348 TGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTC 463289 Query 504 GTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 | || || |||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 463288 GCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGNAAGAGCATAG 463229 Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 |||||||| |||||||| ||| |||||||||| || | ||| ||||| | || Sbjct 463228 CTGTTGGGNCCCGAAAGNTGGNGAACTATGCCNGANTNGGGNGAAGCNANAG 463177 Score = 396 bits (438), Expect = 1e-107 Identities = 431/575 (75%), Gaps = 15/575 (3%) Strand=Plus/Minus Query 52 TTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGA 111 ||||||||| | | || || || || | || || || |||||||| ||||| Sbjct 454605 TTGGGAATGNANCNNNNNGTGNNNGGNAANTTNCATCNAANGCNNNATATTGGCGAGAGA 454546 Query 112 CCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAA 171 ||||||| | ||||||| |||||| ||||||||||||| |||||| |||||||| |||| Sbjct 454545 CCGATAGNGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGAAAA 454486 Query 172 AGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAAC 231 || ||||||||||||||||||||||| || | | ||||| || ||| | Sbjct 454485 AGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT-- 454428 Query 232 CGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCGGT 286 | || ||| | | | | | ||| | ||| |||||||||||| | || || Sbjct 454427 CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTGGC 454369 Query 287 CGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATG 346 ||||||| || ||||||| || | |||| || |||||||| | || |||| Sbjct 454368 AGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAATA 454312 Query 347 CGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAG 404 | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| || | Sbjct 454311 CTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATATG 454252 Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 | |||||||||| |||||||||||||||||||||| |||||||||||||||||| || || Sbjct 454251 CCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGNGTAAA 454192 Query 465 ACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCGAC 522 |||| | ||||||||||||||||||| ||| |||| | || || || || | |||||| Sbjct 454191 ACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCNCAATCGAC 454132 Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 |||||||| ||| ||||| || |||||| ||| ||| |||||||||||||||||||| Sbjct 454131 CGATCCTGNTGTNNTCGGANGGNTTTGAGNAAGNNCATNNCTGTTGGGACCCGAAAGATG 454072 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 |||||||||||| |||||| ||||| ||| ||| Sbjct 454071 NNGAACTATGCCTGNATAGGGNGAAGCNAGANGAA 454037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350