Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670295.1_202016-06-
20] 17 sequences; 12,123,099 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 379 8e-103
>seq12
Length=1077392
Score = 379 bits (420), Expect = 8e-103
Identities = 394/512 (77%), Gaps = 15/512 (3%)
Strand=Plus/Minus
Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151
|||| | || | |||| ||||||||| ||||||| |||||| ||||||||||||| |
Sbjct 463534 AGCTNANNNTTNNCNAGAGNCCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAA 463475
Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGA 211
||||| |||||||| |||||| ||||||||||||||||||||||| || | | ||||
Sbjct 463474 CTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGA 463415
Query 212 CTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GG 266
| || ||| | | || ||| | | | | | ||| | ||| ||
Sbjct 463414 CATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGG 463358
Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326
|||||||||| | || || ||||||| || ||||||| || | |||| ||
Sbjct 463357 CCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTA 463299
Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGAT 384
|||||||| | || |||| | ||| || ||||||||| | ||| | | | |||||
Sbjct 463298 TTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGAT 463241
Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444
|||||| |||||||| || || |||||||||| |||||||||||||||||||||| ||||
Sbjct 463240 GCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTA 463181
Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCC 503
||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | |
Sbjct 463180 TGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTC 463121
Query 504 GTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562
| || || |||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 463120 GCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGNATAN 463061
Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCC 594
||||||||||||||||||||| | | |||||
Sbjct 463060 CTGTTGGGACCCGAAAGATGGNGNANNATGCC 463029
Score = 363 bits (402), Expect = 7e-98
Identities = 390/513 (76%), Gaps = 15/513 (3%)
Strand=Plus/Minus
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
|||||||||| || | | | |||||||||||| ||||| | |||||| |||||||||||
Sbjct 454401 CTAAAGCTAANNATNGNCNANAGACCGATAGCGAACAAGNACAGTGATGGAAAGATGAAA 454342
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
|| |||||| |||||||| |||||| ||||||||||||||||||||||| || | |
Sbjct 454341 AGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGAT 454282
Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA- 264
||||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 454281 CAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCAC 454225
Query 265 --GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 454224 TGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTA 454166
Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTA 380
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | | |
Sbjct 454165 AGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAA 454108
Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440
|||||||||| |||||||| || || |||||||||| ||||||||||||||||||||||
Sbjct 454107 GGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACG 454048
Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGA 499
||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| ||||
Sbjct 454047 TCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGG 453988
Query 500 ACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| || || || |||| ||||||||||||||||||||||||| || ||| ||||||||
Sbjct 453987 CCTCGCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGANGGNTTTNNGTAAGAGC 453928
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTAT 591
||||||| || |||| | |||| |||||||
Sbjct 453927 NTAGCTGTNNNGANCCGANANATGGNGAACTAT 453895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |