Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670325.1_202016-06-
20] 17 sequences; 12,131,042 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 405 2e-110
>seq12
Length=1077582
Score = 405 bits (448), Expect = 2e-110
Identities = 447/603 (74%), Gaps = 15/603 (2%)
Strand=Plus/Minus
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
|||||| | |||| || | |||||| | ||| ||||||| || ||| ||||||||||
Sbjct 463723 TCTAAANNTNAATANNNGCNANAGACCGNTNGCGAACAAGTACAGNGATGGAAAGATGAA 463664
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | |
Sbjct 463663 AAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 463604
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264
||||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 463603 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 463547
Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 463546 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 463488
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | |
Sbjct 463487 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 463430
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||| |||||||| || || |||||||||| ||||||||||||||||||||||
Sbjct 463429 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 463370
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| ||
Sbjct 463369 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 463310
Query 500 ACC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557
|| || || || |||| |||| |||||||||||||||||||||| ||| | |||||||
Sbjct 463309 GCCTCGCAAGAGGNGCACAATCGNCCGATCCTGATGTCTTCGGATGNATTNGNGTAAGAG 463250
Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
|| ||||||||||||||| |||||| | || ||||| || ||||| |||||||| ||||
Sbjct 463249 NATNGCTGTTGGGACCCGANAGATGGNGNACNATGCCNGANTAGGGNGAAGCCAGNGGAA 463190
Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677
|||||| || || | | |||| || | | || || | | ||| || | |
Sbjct 463189 NCTCTGGNGGNGGNTNNTNGNGGTTNNNNCGNGNANATNGANNGNCGAATNNNGGNNTNG 463130
Query 678 GGG 680
|||
Sbjct 463129 GGG 463127
Score = 394 bits (436), Expect = 4e-107
Identities = 412/539 (76%), Gaps = 15/539 (3%)
Strand=Plus/Minus
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
|||||||| ||||| | | |||| ||||||||| ||||| | || ||| |||||||||||
Sbjct 454585 CTAAAGCTNAATATNGNCGAGAGNCCGATAGCGAACAAGNACAGNGATGGAAAGATGAAA 454526
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
|| |||||| ||||||||| |||||| ||||||||||||||||||||||| || | |
Sbjct 454525 AGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGAT 454466
Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA- 264
||||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 454465 CAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCAC 454409
Query 265 --GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 454408 TGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTA 454350
Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTA 380
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | | |
Sbjct 454349 AGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAA 454292
Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440
|||||||||| |||||||| || || |||||||||| ||||||||||||||||||||||
Sbjct 454291 GGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACG 454232
Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGA 499
|||||||||| |||||||||| |||||| | ||||||||||||||||||| ||| ||||
Sbjct 454231 TCTATGCGAGNGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGG 454172
Query 500 ACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| || || || |||| |||||| |||||||||||||||| || |||| ||||| ||
Sbjct 454171 CCTCGCAAGAGGNGCACAATCGACNGATCCTGATGTCTTCGNNTGNNTTTGNGTAAGNGC 454112
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
|||| ||||||| ||||||| || |||||| |||||||||||| || ||||||||||
Sbjct 454111 ATAGNTGTTGGGNNCCGAAAGNNGGNGAACTANGCCTGAATAGGGNGANGCCAGAGGAA 454053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |