Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670325.1_202016-06- 20] 17 sequences; 12,131,042 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 405 2e-110 >seq12 Length=1077582 Score = 405 bits (448), Expect = 2e-110 Identities = 447/603 (74%), Gaps = 15/603 (2%) Strand=Plus/Minus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||| | |||| || | |||||| | ||| ||||||| || ||| |||||||||| Sbjct 463723 TCTAAANNTNAATANNNGCNANAGACCGNTNGCGAACAAGTACAGNGATGGAAAGATGAA 463664 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 463663 AAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 463604 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 463603 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 463547 Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 463546 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 463488 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | Sbjct 463487 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 463430 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 463429 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 463370 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 ||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| || Sbjct 463369 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 463310 Query 500 ACC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 || || || || |||| |||| |||||||||||||||||||||| ||| | ||||||| Sbjct 463309 GCCTCGCAAGAGGNGCACAATCGNCCGATCCTGATGTCTTCGGATGNATTNGNGTAAGAG 463250 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 || ||||||||||||||| |||||| | || ||||| || ||||| |||||||| |||| Sbjct 463249 NATNGCTGTTGGGACCCGANAGATGGNGNACNATGCCNGANTAGGGNGAAGCCAGNGGAA 463190 Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677 |||||| || || | | |||| || | | || || | | ||| || | | Sbjct 463189 NCTCTGGNGGNGGNTNNTNGNGGTTNNNNCGNGNANATNGANNGNCGAATNNNGGNNTNG 463130 Query 678 GGG 680 ||| Sbjct 463129 GGG 463127 Score = 394 bits (436), Expect = 4e-107 Identities = 412/539 (76%), Gaps = 15/539 (3%) Strand=Plus/Minus Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 |||||||| ||||| | | |||| ||||||||| ||||| | || ||| ||||||||||| Sbjct 454585 CTAAAGCTNAATATNGNCGAGAGNCCGATAGCGAACAAGNACAGNGATGGAAAGATGAAA 454526 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 || |||||| ||||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 454525 AGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGAT 454466 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA- 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 454465 CAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCAC 454409 Query 265 --GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 454408 TGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTA 454350 Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTA 380 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | | Sbjct 454349 AGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAA 454292 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 454291 GGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACG 454232 Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGA 499 |||||||||| |||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 454231 TCTATGCGAGNGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGG 454172 Query 500 ACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | || || || |||| |||||| |||||||||||||||| || |||| ||||| || Sbjct 454171 CCTCGCAAGAGGNGCACAATCGACNGATCCTGATGTCTTCGNNTGNNTTTGNGTAAGNGC 454112 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 |||| ||||||| ||||||| || |||||| |||||||||||| || |||||||||| Sbjct 454111 ATAGNTGTTGGGNNCCGAAAGNNGGNGAACTANGCCTGAATAGGGNGANGCCAGAGGAA 454053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350