Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670355.1_202016-06- 20] 17 sequences; 12,085,481 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 401 3e-109 >seq12 Length=1077384 Score = 401 bits (444), Expect = 3e-109 Identities = 413/537 (77%), Gaps = 15/537 (3%) Strand=Plus/Minus Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151 || || || ||| |||||||||||||| ||||||| ||||| ||||| ||||||| | Sbjct 454427 AGNTANATNNTGGNGAGAGACCGATAGCGAACAAGTACAGTGANGGAAAGNTGAAAAGAA 454368 Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGA 211 ||||| |||||||| |||||| ||||||||||||||||||||||| || | | |||| Sbjct 454367 CTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGA 454308 Query 212 CTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GG 266 | || ||| | | || ||| | | | | | ||| | ||| || Sbjct 454307 CATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGG 454251 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 |||||||||| | || || ||||||| || ||||||| || | |||| || Sbjct 454250 CCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTA 454192 Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGAT 384 |||||||| | || |||| | ||| || ||||||||| | ||| | | | ||||| Sbjct 454191 TTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGAT 454134 Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444 |||||| |||||||| || || |||||||||| |||||||||||||||||||||| |||| Sbjct 454133 GCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTA 454074 Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCC 503 ||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | | Sbjct 454073 TGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTC 454014 Query 504 GTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 | || ||||||| |||||||||||||||||||||||||||||||||| |||||||| || Sbjct 454013 GCAAGAGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGANTAAGAGCANAG 453954 Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619 ||||| |||||||||||||| ||||||| ||| ||| ||| || |||||| ||| Sbjct 453953 NTGTTGNGACCCGAAAGATGGNGAACTATNCCTNAATNGGGNGANNNCAGAGGNAAC 453897 Score = 383 bits (424), Expect = 7e-104 Identities = 414/549 (75%), Gaps = 15/549 (3%) Strand=Plus/Minus Query 81 ATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAA 140 ||| | || ||| | ||| |||| | | | ||||| ||||| | |||||| |||| Sbjct 463575 ATTCCNTCNAAANCNAAANATTGNCGNNNGNNNGNTAGCGAACAAGNACAGTGATGGAAA 463516 Query 141 GATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200 ||||||||| |||||| ||||| || |||||| ||||||||||||||||||||||| || Sbjct 463515 GATGAAAAGAACTTTGAAAAGANAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGC 463456 Query 201 TTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTG 258 | | ||||| || ||| | | || ||| | | | | | ||| | Sbjct 463455 ATTTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGC 463399 Query 259 CGGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCC 315 ||| |||||||||||| | || || ||||||| || ||||||| || | Sbjct 463398 ATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGC 463340 Query 316 TTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--T 373 |||| || |||||||| | || |||| | ||| || ||||||||| | ||| | Sbjct 463339 CTCGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGT 463282 Query 374 CCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAG 433 | | ||||||||||| |||||||| || || |||||||||| |||||||||||||||| Sbjct 463281 AAGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAG 463222 Query 434 TCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAG 493 |||||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| || Sbjct 463221 TCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAG 463162 Query 494 G-TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551 | |||| | || || || |||| ||||||||||||||||||||||||||||||||||| Sbjct 463161 GTTGGGGCCTCGCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 463102 Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611 |||||||||||||||||| |||| | ||||| | | |||||||| ||||| || | | Sbjct 463101 NAAGAGCATAGCTGTTGGGNCCCGNANGATGGNGNANNATGCCTGANTAGGGNGANGNNA 463042 Query 612 GAGGAAACT 620 ||||| ||| Sbjct 463041 GAGGANACT 463033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350