Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670355.1_202016-06-
20] 17 sequences; 12,085,481 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq12 194 3e-47
>seq12
Length=1077384
Score = 194 bits (214), Expect = 3e-47
Identities = 204/260 (78%), Gaps = 18/260 (7%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 460861 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 460804
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 460803 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 460744
Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169
||||| ||||| |||| | || |||| ||| |||||||||| |||| |
Sbjct 460743 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 460684
Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
|| | | ||||| |||||||| ||||||| || |||||| || ||| |||
Sbjct 460683 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGNGCT- 460625
Query 226 AGCTGGCGGATTGCAATTTC 245
||||||| ||||||| ||
Sbjct 460624 TGCTGGCGANTTGCAATGTC 460605
Score = 190 bits (210), Expect = 3e-46
Identities = 172/211 (82%), Gaps = 14/211 (7%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 451724 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 451667
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 451666 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 451607
Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169
||||| ||||| |||| | || |||| ||| |||||||||| |||| |
Sbjct 451606 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 451547
Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG 199
|| | | ||||| |||||||| |||||||
Sbjct 451546 GCGTCGCTGAACCATAGCAGGCTAGCAACGG 451516
Score = 102 bits (112), Expect = 1e-19
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 489692 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 489635
Query 61 GCCGCGAAGCTACCATCTGCTGGAT 85
||||||||||||||||| |||||||
Sbjct 489634 GCCGCGAAGCTACCATCCGCTGGAT 489610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199865088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |