Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670415.1_202016-06-
20] 17 sequences; 12,102,038 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 302 2e-79
>seq12
Length=1077541
Score = 302 bits (334), Expect = 2e-79
Identities = 384/534 (72%), Gaps = 15/534 (3%)
Strand=Plus/Minus
Query 90 AAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149
|||| ||||| | ||| || ||||||||||| ||||||| |||||| |||||||||||||
Sbjct 454575 AAAGNTAAATNTNGGCGAGNGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAG 454516
Query 150 CACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCA 209
|||||| |||||||| |||||| ||||||||||||||||||||||| || | | ||
Sbjct 454515 AACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCA 454456
Query 210 GACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA--- 264
||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 454455 GACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTG 454399
Query 265 GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324
|||||||||||| | || || ||||||| || ||||||| || | |||| |
Sbjct 454398 GGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAG 454340
Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGG 382
| |||||||| | || |||| | ||| || ||||||||| | ||| | | | |||
Sbjct 454339 TATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGG 454282
Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442
|||||||| |||||||| || || |||||||||| |||||||||||||||||||||| ||
Sbjct 454281 ATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTC 454222
Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAAC 501
||||||||||||||||||| |||||| | ||||||||||||| ||||| ||| |||| |
Sbjct 454221 TATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGNGAACGTAGGTTGGGGCC 454162
Query 502 CCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560
|| || || |||| |||| ||| |||||| || || ||||| | | |||| |
Sbjct 454161 TCGCAAGAGGNGCACAATCGNCCGNTCCTGANNTCNNCGNNNGGATTNGNGNAAGANNNT 454102
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
| | || | | | | | || ||| |||| || | || | |||||
Sbjct 454101 ANCNNTTNGNANCNGNNANNNGGNGAANNATGCNNNNNNAGNGNGANGNCAGAG 454048
Score = 300 bits (332), Expect = 7e-79
Identities = 358/484 (74%), Gaps = 15/484 (3%)
Strand=Plus/Minus
Query 123 CAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182
|| | | |||||| ||||||||||||| |||||| |||||||| |||||| ||||||||
Sbjct 463679 CANGNACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAA 463620
Query 183 TTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGG 242
||||||||||||||| || | | ||||| || ||| | | || ||| |
Sbjct 463619 TTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGT 463562
Query 243 CCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGC 297
| | | | ||| | ||| |||||||||||| | || || ||||||| |
Sbjct 463561 GGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-C 463504
Query 298 CCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTG 357
| ||||||| || | |||| || |||||||| | || |||| | ||| || |
Sbjct 463503 CATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGG 463446
Query 358 GACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTT 415
|||||||| | ||| | | | ||||||||||| |||||||| || || |||||||||
Sbjct 463445 GACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTT 463386
Query 416 GGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCG 475
| |||||||||||||||||||||| ||||||||||||||||||||| |||||| | ||||
Sbjct 463385 GAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCG 463326
Query 476 TAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATG 533
||||||||||||||| ||| |||| | || || || |||| ||||| |||||| || |
Sbjct 463325 TAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAATCGANCGATCCNGANG 463266
Query 534 TCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGC 593
||||||||||||| ||| ||| | | | | |||||| ||||| || || | || ||
Sbjct 463265 TCTTCGGATGGATNTGANNAAGNGNANANCNGTTGGGNNCCGAANGANGGNNANCTNTGN 463206
Query 594 CTGA 597
| ||
Sbjct 463205 CNGA 463202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |