Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670415.1_202016-06- 20] 17 sequences; 12,102,038 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 302 2e-79 >seq12 Length=1077541 Score = 302 bits (334), Expect = 2e-79 Identities = 384/534 (72%), Gaps = 15/534 (3%) Strand=Plus/Minus Query 90 AAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149 |||| ||||| | ||| || ||||||||||| ||||||| |||||| ||||||||||||| Sbjct 454575 AAAGNTAAATNTNGGCGAGNGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAG 454516 Query 150 CACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCA 209 |||||| |||||||| |||||| ||||||||||||||||||||||| || | | || Sbjct 454515 AACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCA 454456 Query 210 GACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA--- 264 ||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 454455 GACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTG 454399 Query 265 GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324 |||||||||||| | || || ||||||| || ||||||| || | |||| | Sbjct 454398 GGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAG 454340 Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGG 382 | |||||||| | || |||| | ||| || ||||||||| | ||| | | | ||| Sbjct 454339 TATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGG 454282 Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442 |||||||| |||||||| || || |||||||||| |||||||||||||||||||||| || Sbjct 454281 ATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTC 454222 Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAAC 501 ||||||||||||||||||| |||||| | ||||||||||||| ||||| ||| |||| | Sbjct 454221 TATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGNGAACGTAGGTTGGGGCC 454162 Query 502 CCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560 || || || |||| |||| ||| |||||| || || ||||| | | |||| | Sbjct 454161 TCGCAAGAGGNGCACAATCGNCCGNTCCTGANNTCNNCGNNNGGATTNGNGNAAGANNNT 454102 Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 | | || | | | | | || ||| |||| || | || | ||||| Sbjct 454101 ANCNNTTNGNANCNGNNANNNGGNGAANNATGCNNNNNNAGNGNGANGNCAGAG 454048 Score = 300 bits (332), Expect = 7e-79 Identities = 358/484 (74%), Gaps = 15/484 (3%) Strand=Plus/Minus Query 123 CAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 || | | |||||| ||||||||||||| |||||| |||||||| |||||| |||||||| Sbjct 463679 CANGNACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAA 463620 Query 183 TTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGG 242 ||||||||||||||| || | | ||||| || ||| | | || ||| | Sbjct 463619 TTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGT 463562 Query 243 CCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGC 297 | | | | ||| | ||| |||||||||||| | || || ||||||| | Sbjct 463561 GGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-C 463504 Query 298 CCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTG 357 | ||||||| || | |||| || |||||||| | || |||| | ||| || | Sbjct 463503 CATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGG 463446 Query 358 GACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTT 415 |||||||| | ||| | | | ||||||||||| |||||||| || || ||||||||| Sbjct 463445 GACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTT 463386 Query 416 GGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCG 475 | |||||||||||||||||||||| ||||||||||||||||||||| |||||| | |||| Sbjct 463385 GAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCG 463326 Query 476 TAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATG 533 ||||||||||||||| ||| |||| | || || || |||| ||||| |||||| || | Sbjct 463325 TAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAATCGANCGATCCNGANG 463266 Query 534 TCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGC 593 ||||||||||||| ||| ||| | | | | |||||| ||||| || || | || || Sbjct 463265 TCTTCGGATGGATNTGANNAAGNGNANANCNGTTGGGNNCCGAANGANGGNNANCTNTGN 463206 Query 594 CTGA 597 | || Sbjct 463205 CNGA 463202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350