Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670415.1_202016-06- 20] 17 sequences; 12,102,038 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq12 230 4e-58 >seq12 Length=1077541 Score = 230 bits (254), Expect = 4e-58 Identities = 175/205 (85%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 455954 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 456013 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCA 118 |||||||||||||||||||||||| |||| ||| || |||||||||||||||| | | Sbjct 456014 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 456073 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| || | | |||||||| |||||||||||||||||||||||| ||| Sbjct 456074 ACCAGCAA--ATGCTAG-CACCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 456130 Query 179 TAACCAGACAAATCACTCCACCAAC 203 ||| |||||||| | |||| ||||| Sbjct 456131 TAAGCAGACAAANCNCTCCNCCAAC 456155 Score = 215 bits (238), Expect = 8e-54 Identities = 171/205 (83%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 465091 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 465150 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCA 118 |||||||||||||||||||||||| |||| ||| || |||||||||||||||| | | Sbjct 465151 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 465210 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| || | | |||||||| |||||||||||||||||||||||| ||| Sbjct 465211 ACCAGCAA--ATGCTAG-CACCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 465267 Query 179 TAACCAGACAAATCACTCCACCAAC 203 ||| |||||| | || | |||| Sbjct 465268 TAAGCAGACANANNNCTNCNNCAAC 465292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799868777