Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670935.1_202016-06- 20] 17 sequences; 12,128,951 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 338 3e-90 >seq12 Length=1077481 Score = 338 bits (374), Expect = 3e-90 Identities = 375/497 (75%), Gaps = 15/497 (3%) Strand=Plus/Minus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 ||| ||||||| ||| ||| |||| ||||||||| ||||||| |||||| |||||||||| Sbjct 463677 TCTNAAGCTAANTATNGGCGAGAGNCCGATAGCGAACAAGTACAGTGATGGAAAGATGAA 463618 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 463617 AAGAACTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 463558 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 463557 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 463501 Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 463500 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 463442 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | Sbjct 463441 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 463384 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 463383 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 463324 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498 |||||||||| |||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 463323 GTCTATGCGAGNGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 463264 Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 | || || || |||| |||||||||||||| |||||||| ||| |||||| ||| | Sbjct 463263 GCCTCGCAAGAGGNGCACAATCGACCGATCCTGNTGTCTTCGNNTGGNTTTGAGNAAGNG 463204 Query 558 CATAGCTGTTGGGACCC 574 || ||| |||| || Sbjct 463203 CANNNNTGTNGGGANCC 463187 Score = 324 bits (358), Expect = 6e-86 Identities = 374/503 (74%), Gaps = 15/503 (3%) Strand=Plus/Minus Query 89 TAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148 || || ||| ||| | | | ||||||||| ||||| | |||||| |||||||||||| Sbjct 454538 TANAGNNAAANATTNGNNNGNGNCCGATAGCGNACAAGNACAGTGATGGAAAGATGAAAA 454479 Query 149 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208 | |||||| |||||||| |||||| ||||||||||||||||||||||| || | | | Sbjct 454478 GAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATC 454419 Query 209 AGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA-- 264 |||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 454418 AGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACT 454362 Query 265 -GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 454361 GGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAA 454303 Query 324 GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAG 381 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | || Sbjct 454302 GTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAG 454245 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 ||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| | Sbjct 454244 GATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGT 454185 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAA 500 ||||||||||||||||| || |||||| | ||||||||||||| ||||| ||| |||| Sbjct 454184 CTATGCGAGTGTTTGGGNGTAAAACCCATACGCGTAATGAAAGNGAACGTAGGTTGGGGC 454125 Query 501 CCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 | || || || |||| |||||||||||||||||| || ||||||||||||||||||| Sbjct 454124 CTCGCAAGAGGNGCACAATCGACCGATCCTGATGTNTTNGGATGGATTTGAGTAAGAGNN 454065 Query 560 TAGCTGTTGGGACCCGAAAGATG 582 |||||| | || ||| | || Sbjct 454064 NNGCTGTTNGNNCCNGAANGNTG 454042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350