Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670965.1_202016-06- 20] 17 sequences; 12,114,202 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 437 4e-120 >seq12 Length=1077484 Score = 437 bits (484), Expect = 4e-120 Identities = 438/566 (77%), Gaps = 15/566 (3%) Strand=Plus/Minus Query 45 GAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGG 104 |||||| ||||||| | ||| |||| || ||| |||| |||||||||||||||||| Sbjct 463696 GAGTTGNTTGGGAANGNAGCNCTAAGNGGNNGGTNAATTCNATCTAAAGCTAAATATTGG 463637 Query 105 CCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGA 164 | |||||||||||||| ||||||| || ||| ||||||||||||| |||||| ||||||| Sbjct 463636 CNAGAGACCGATAGCGAACAAGTACAGNGATGGAAAGATGAAAAGAACTTTGAAAAGAGA 463577 Query 165 GTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTT 224 | |||||| ||||||||||||||||||||||| || | | ||||| || | Sbjct 463576 GNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGT 463517 Query 225 GCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTC 279 || | | || ||| | | | | | ||| | ||| |||||||||||| | Sbjct 463516 GCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTT 463460 Query 280 GGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGG 339 || || ||||||| || ||||||| || | |||| || |||||||| | || Sbjct 463459 TGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG 463401 Query 340 TGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGG 397 |||| | ||| || ||||||||| | ||| | | | ||||||||||| |||||| Sbjct 463400 --GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGG 463343 Query 398 TTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGG 457 || || || |||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 463342 TTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGG 463283 Query 458 GTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCAC 515 | || |||||| | ||||||||||||||||||| ||| |||| | || || || |||| Sbjct 463282 GNGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCAC 463223 Query 516 CATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCG 575 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 463222 AATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGNNGTTGGGACCCN 463163 Query 576 AAAGATGGTGAACTATGCCTGAATAG 601 ||||| || || ||||| ||| ||| Sbjct 463162 AAAGANGGNGANCTATGNNTGANTAG 463137 Score = 379 bits (420), Expect = 8e-103 Identities = 407/537 (76%), Gaps = 15/537 (3%) Strand=Plus/Minus Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 |||||||| |||||||| |||||||||||||| ||||||| |||||| ||||||||||| Sbjct 454516 CTAAAGCTNNATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAA 454457 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 || |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 454456 AGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGAT 454397 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA- 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 454396 CAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCAC 454340 Query 265 --GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 454339 TGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTA 454281 Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTA 380 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | | Sbjct 454280 AGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAA 454223 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 454222 GGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACG 454163 Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGA 499 ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 454162 TCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGG 454103 Query 500 ACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | || || || |||| |||||||||||| ||||||||||| |||||||||| |||||| Sbjct 454102 CCTCGCAAGAGGNGCACAATCGACCGATCCNGATGTCTTCGGNTGGATTTGAGNAAGAGC 454043 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615 || || || | || | ||||||| | | | |||| | || | ||||| || || Sbjct 454042 ATNNCTNTTNNGNCCNGNAAGATGGNGNANNANGCCTNANTANNGNGAAGCNAGNGG 453986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350