Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670995.1_202016-06- 20] 17 sequences; 12,124,525 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 403 7e-110 >seq12 Length=1077438 Score = 403 bits (446), Expect = 7e-110 Identities = 446/599 (74%), Gaps = 15/599 (3%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||| | | | ||||||||| ||||| ||| | || |||| || ||| Sbjct 463669 TGTAAAGTGCCTTNGNAGNGNCGAGTTGTTNNGGAATNNAGCNCNAAGTGGGNGGNAAAN 463610 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | ||||||||||||| |||| |||||||||||||| ||||||| |||||| |||||| Sbjct 463609 NCCNTCTAAAGCTAAATNTTGGNGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 463550 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | Sbjct 463549 TGAAAAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 463490 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCG 260 | ||||| || ||| | | || ||| | | | | | ||| | Sbjct 463489 TTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCAT 463433 Query 261 GTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 ||| |||||||||||| | || || ||||||| || ||||||| || | | Sbjct 463432 TTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCT 463374 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCC 375 ||| || |||||||| | || |||| | ||| || ||||||||| | ||| | Sbjct 463373 CGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAA 463316 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | | ||||||||||| |||||||| || || |||||||||| |||||||||||||||||| Sbjct 463315 GTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTC 463256 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG- 494 |||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| Sbjct 463255 TAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGT 463196 Query 495 TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 |||| | || || || |||| |||| ||||||||||| ||||||||||| || | ||| Sbjct 463195 TGGGGCCTCGCAAGAGGNGCACAATCGNCCGATCCTGATNTCTTCGGATGGNTTNGNGTA 463136 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 || ||||| ||||| | | |||| | | ||| ||| | || ||| || ||||| Sbjct 463135 AGNGCATANCTGTTNNGNNNCNAAAGNNGNNNANCTANGCCNGNATNGGGNGANGCCAG 463077 Score = 343 bits (380), Expect = 6e-92 Identities = 369/481 (77%), Gaps = 15/481 (3%) Strand=Plus/Minus Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| || |||||||| ||| ||||||| || ||| ||||||||||||| |||||| || Sbjct 454455 ATTNGCGNGAGACCGANAGCNAACAAGTACAGNGATGGAAAGATGAAAAGAACTTTGAAA 454396 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219 |||||| |||||| ||||||||||||||||||||||| || | | ||||| || Sbjct 454395 AGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGT 454336 Query 220 CAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATC 274 ||| | | || ||| | | | | | ||| | ||| |||||||||| Sbjct 454335 TTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATC 454279 Query 275 AGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCC 334 || | || || ||||||| || ||||||| || | |||| || |||||||| Sbjct 454278 AGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCC 454220 Query 335 CGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGT 392 | || |||| | ||| || ||||||||| | ||| | | | ||||||||||| | Sbjct 454219 TGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCAT 454162 Query 393 AATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTG 452 ||||||| || || |||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 454161 AATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTG 454102 Query 453 TTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GG 510 ||||||||| |||||| | ||||||||||||||||||| ||| |||| | || || || Sbjct 454101 TTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGG 454042 Query 511 TGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGG 570 |||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct 454041 NGCACAATCGACCGATCCTGATGTCTTCGGATGGANTTGNGTAAGAGCATAGCTGTTGGG 453982 Query 571 A 571 | Sbjct 453981 A 453981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350