Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001670995.1_202016-06- 20] 17 sequences; 12,124,525 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq12 192 1e-46 >seq12 Length=1077438 Score = 192 bits (212), Expect = 1e-46 Identities = 222/293 (76%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| | Sbjct 460897 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 460840 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 460839 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 460780 Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169 ||||| ||||| |||| | || |||| ||| |||||||||| |||| | Sbjct 460779 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 460720 Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 || | | ||||| |||||||| ||||||| || |||||| || || ||| Sbjct 460719 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTNGGNGCT- 460661 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| ||| ||| | ||| | || ||| |||||| |||| | ||||| Sbjct 460660 TGCTNGCGANTTGNNNTGTCATTTTNCGTGGGGNTAAATCATTTGTATACGAC 460608 Score = 190 bits (210), Expect = 3e-46 Identities = 172/211 (82%), Gaps = 14/211 (7%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| | Sbjct 451760 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 451703 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 451702 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 451643 Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169 ||||| ||||| |||| | || |||| ||| |||||||||| |||| | Sbjct 451642 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 451583 Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG 199 || | | ||||| |||||||| ||||||| Sbjct 451582 GCGTCGCTGAACCATAGCAGGCTAGCAACGG 451552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199865088