Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671025.1_202016-06- 20] 17 sequences; 12,111,362 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 430 5e-118 >seq12 Length=1076962 Score = 430 bits (476), Expect = 5e-118 Identities = 423/541 (78%), Gaps = 15/541 (3%) Strand=Plus/Minus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 ||| || |||||| ||| |||||||||||||| ||||||| |||||| |||||||||| Sbjct 454095 TCTNAANCTAAATNNNGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAA 454036 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 454035 AAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 453976 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 453975 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 453919 Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 453918 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 453860 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | Sbjct 453859 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 453802 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 453801 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 453742 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 ||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| || Sbjct 453741 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 453682 Query 500 ACC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 || || || || |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct 453681 GCCTCGCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGNGTAAGAG 453622 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 ||||||||||||||||||||||| || |||||||||| |||| ||| ||| ||||| ||| Sbjct 453621 CATAGCTGTTGGGACCCGAAAGANGGNGAACTATGCCNGAATNGGGNGAANCCAGANGAA 453562 Query 618 A 618 | Sbjct 453561 A 453561 Score = 349 bits (386), Expect = 1e-93 Identities = 389/518 (75%), Gaps = 15/518 (3%) Strand=Plus/Minus Query 90 AAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149 ||||||||| || ||| |||||||||||||| |||| | |||||| ||||||||||||| Sbjct 463229 AAAGCTAAANATNGGCGAGAGACCGATAGCGAACAANTNCAGTGATGGAAAGATGAAAAG 463170 Query 150 CACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCA 209 |||||| ||||||||| |||||| ||||||||||||||||||||||| || | | || Sbjct 463169 AACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCA 463110 Query 210 GACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA--- 264 ||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 463109 GACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTG 463053 Query 265 GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324 |||||||||||| | || || ||||||| || ||||||| || | |||| | Sbjct 463052 GGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAG 462994 Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGG 382 | |||||||| | || |||| | ||| || ||||||||| | ||| | | | ||| Sbjct 462993 TATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGG 462936 Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442 |||||||| |||||||| || || |||||||||| |||||||||||||||||||||| || Sbjct 462935 ATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTC 462876 Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAAC 501 ||||||||||||||||||| |||||| | ||||||||||||| ||||| ||| |||| | Sbjct 462875 TATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGNGAACGTAGGTTGGGGCC 462816 Query 502 CCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560 || || || |||| |||| |||||||||||||||| || || || |||||||| ||| Sbjct 462815 TCGCAAGAGGNGCACAATCGNCCGATCCTGATGTCTTNNGANGGNTTNGAGTAAGANCAT 462756 Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598 || |||| || |||||| ||| | | |||||| Sbjct 462755 AGNTGTTNNGANNNNNNAGATGGNGAANTNTNCCTGAA 462718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350