Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671025.1_202016-06-
20] 17 sequences; 12,111,362 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 430 5e-118
>seq12
Length=1076962
Score = 430 bits (476), Expect = 5e-118
Identities = 423/541 (78%), Gaps = 15/541 (3%)
Strand=Plus/Minus
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
||| || |||||| ||| |||||||||||||| ||||||| |||||| ||||||||||
Sbjct 454095 TCTNAANCTAAATNNNGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAA 454036
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | |
Sbjct 454035 AAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 453976
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264
||||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 453975 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 453919
Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 453918 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 453860
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | |
Sbjct 453859 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 453802
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||| |||||||| || || |||||||||| ||||||||||||||||||||||
Sbjct 453801 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 453742
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| ||
Sbjct 453741 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 453682
Query 500 ACC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557
|| || || || |||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct 453681 GCCTCGCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGNGTAAGAG 453622
Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
||||||||||||||||||||||| || |||||||||| |||| ||| ||| ||||| |||
Sbjct 453621 CATAGCTGTTGGGACCCGAAAGANGGNGAACTATGCCNGAATNGGGNGAANCCAGANGAA 453562
Query 618 A 618
|
Sbjct 453561 A 453561
Score = 349 bits (386), Expect = 1e-93
Identities = 389/518 (75%), Gaps = 15/518 (3%)
Strand=Plus/Minus
Query 90 AAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149
||||||||| || ||| |||||||||||||| |||| | |||||| |||||||||||||
Sbjct 463229 AAAGCTAAANATNGGCGAGAGACCGATAGCGAACAANTNCAGTGATGGAAAGATGAAAAG 463170
Query 150 CACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCA 209
|||||| ||||||||| |||||| ||||||||||||||||||||||| || | | ||
Sbjct 463169 AACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCA 463110
Query 210 GACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA--- 264
||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 463109 GACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTG 463053
Query 265 GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324
|||||||||||| | || || ||||||| || ||||||| || | |||| |
Sbjct 463052 GGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAG 462994
Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGG 382
| |||||||| | || |||| | ||| || ||||||||| | ||| | | | |||
Sbjct 462993 TATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGG 462936
Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442
|||||||| |||||||| || || |||||||||| |||||||||||||||||||||| ||
Sbjct 462935 ATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTC 462876
Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAAC 501
||||||||||||||||||| |||||| | ||||||||||||| ||||| ||| |||| |
Sbjct 462875 TATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGNGAACGTAGGTTGGGGCC 462816
Query 502 CCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560
|| || || |||| |||| |||||||||||||||| || || || |||||||| |||
Sbjct 462815 TCGCAAGAGGNGCACAATCGNCCGATCCTGATGTCTTNNGANGGNTTNGAGTAAGANCAT 462756
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598
|| |||| || |||||| ||| | | ||||||
Sbjct 462755 AGNTGTTNNGANNNNNNAGATGGNGAANTNTNCCTGAA 462718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
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