Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671055.1_202016-06-
20] 17 sequences; 12,120,870 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 340 7e-91
>seq12
Length=1077515
Score = 340 bits (376), Expect = 7e-91
Identities = 397/540 (74%), Gaps = 15/540 (3%)
Strand=Plus/Minus
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
|||||||||| ||||||| | ||||||||||| ||||||| || ||| ||||||||||
Sbjct 463736 TCTAAAGCTANNTATTGGCNNGNGACCGATAGCGAACAAGTACAGNGATGGAAAGATGAA 463677
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | |
Sbjct 463676 AAGAACTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 463617
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264
||||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 463616 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 463560
Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 463559 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 463501
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | |
Sbjct 463500 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 463443
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||| |||||||| || || |||||||||| ||||||||||||||||||||||
Sbjct 463442 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 463383
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498
||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| ||||
Sbjct 463382 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 463323
Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557
| || || || |||| ||||||||||| ||||||||||||||| || || || |
Sbjct 463322 GCCTCGCAAGAGGNGCACAATCGACCGATCNTGATGTCTTCGGATGNNTTNNAGNAANNG 463263
Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
|| | || || ||| | | ||| || | | ||||| | || || | | ||||
Sbjct 463262 NATNGNNGTNGGNNNCCGNANGNTGGNGANCNANGCCTGNANNGGNNNAANCNNGNGGAA 463203
Score = 324 bits (358), Expect = 6e-86
Identities = 393/540 (73%), Gaps = 15/540 (3%)
Strand=Plus/Minus
Query 89 TAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148
||| || || ||||| ||||||| |||||| ||||| | |||||| ||||||||||||
Sbjct 454597 TAANNCTNAANATTGGNGAGAGACCNATAGCGAACAAGNACAGTGATGGAAAGATGAAAA 454538
Query 149 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208
| |||||| |||||||| |||||| ||||||||||||||||||||||| || | | |
Sbjct 454537 GAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATC 454478
Query 209 AGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA-- 264
|||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 454477 AGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACT 454421
Query 265 -GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 454420 GGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAA 454362
Query 324 GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAG 381
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | | ||
Sbjct 454361 GTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAG 454304
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| |
Sbjct 454303 GATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGT 454244
Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAA 500
|||||||||||||||||||| |||||| | ||||||||||||||||||| ||| ||||
Sbjct 454243 CTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGC 454184
Query 501 CCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
| || || || |||| ||||||||| |||||||||||||| | | ||||| |
Sbjct 454183 CTCGCAAGAGGNGCACAATCGACCGANCCTGATGTCTTCGGNTNGNNNNNNGTAAGNNCN 454124
Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619
| | || | | || |||| || ||| | ||||||| || | | | ||| ||||
Sbjct 454123 TNGNTGNNNGNNCNCGNAAGANGGNGAANTNTGCCTGANTANGNNGNNGNCAGNNNAAAC 454064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |