Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671055.1_202016-06- 20] 17 sequences; 12,120,870 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 340 7e-91 >seq12 Length=1077515 Score = 340 bits (376), Expect = 7e-91 Identities = 397/540 (74%), Gaps = 15/540 (3%) Strand=Plus/Minus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||||||||| ||||||| | ||||||||||| ||||||| || ||| |||||||||| Sbjct 463736 TCTAAAGCTANNTATTGGCNNGNGACCGATAGCGAACAAGTACAGNGATGGAAAGATGAA 463677 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 463676 AAGAACTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 463617 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 463616 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 463560 Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 463559 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 463501 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | Sbjct 463500 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 463443 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 463442 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 463383 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498 ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 463382 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 463323 Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 | || || || |||| ||||||||||| ||||||||||||||| || || || | Sbjct 463322 GCCTCGCAAGAGGNGCACAATCGACCGATCNTGATGTCTTCGGATGNNTTNNAGNAANNG 463263 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 || | || || ||| | | ||| || | | ||||| | || || | | |||| Sbjct 463262 NATNGNNGTNGGNNNCCGNANGNTGGNGANCNANGCCTGNANNGGNNNAANCNNGNGGAA 463203 Score = 324 bits (358), Expect = 6e-86 Identities = 393/540 (73%), Gaps = 15/540 (3%) Strand=Plus/Minus Query 89 TAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148 ||| || || ||||| ||||||| |||||| ||||| | |||||| |||||||||||| Sbjct 454597 TAANNCTNAANATTGGNGAGAGACCNATAGCGAACAAGNACAGTGATGGAAAGATGAAAA 454538 Query 149 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208 | |||||| |||||||| |||||| ||||||||||||||||||||||| || | | | Sbjct 454537 GAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATC 454478 Query 209 AGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA-- 264 |||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 454477 AGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACT 454421 Query 265 -GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 454420 GGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAA 454362 Query 324 GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAG 381 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | || Sbjct 454361 GTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAG 454304 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 ||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| | Sbjct 454303 GATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGT 454244 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAA 500 |||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 454243 CTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGC 454184 Query 501 CCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 | || || || |||| ||||||||| |||||||||||||| | | ||||| | Sbjct 454183 CTCGCAAGAGGNGCACAATCGACCGANCCTGATGTCTTCGGNTNGNNNNNNGTAAGNNCN 454124 Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619 | | || | | || |||| || ||| | ||||||| || | | | ||| |||| Sbjct 454123 TNGNTGNNNGNNCNCGNAAGANGGNGAANTNTGCCTGANTANGNNGNNGNCAGNNNAAAC 454064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350