Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671085.1_202016-06- 20] 17 sequences; 12,126,160 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 452 2e-124 >seq12 Length=1077202 Score = 452 bits (500), Expect = 2e-124 Identities = 439/561 (78%), Gaps = 15/561 (3%) Strand=Plus/Minus Query 79 AAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 138 ||| | | |||| |||||||| ||||| ||||||||||| || ||||||| |||||| || Sbjct 454227 AAANTCCATCTANAGCTAAATNTTGGCNAGAGACCGATANCGAACAAGTACAGTGATGGA 454168 Query 139 AAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 ||||||||||| |||||| |||||||| |||||| ||||||||||||||||||||||| Sbjct 454167 AAGATGAAAAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGG 454108 Query 199 GCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTC 256 || | | ||||| || ||| | | || ||| | | | | | ||| | Sbjct 454107 GCATTTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-C 454051 Query 257 TGCGGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCC 313 ||| |||||||||||| | || || ||||||| || ||||||| || Sbjct 454050 GCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTT 453992 Query 314 CCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC- 372 | |||| || |||||||| | || |||| | ||| || ||||||||| | ||| Sbjct 453991 GCCTCGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGAC 453934 Query 373 -TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGG 431 | | | ||||||||||| |||||||| || || |||||||||| |||||||||||||| Sbjct 453933 GTAAGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGG 453874 Query 432 AGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG 491 |||||||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| Sbjct 453873 AGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGT 453814 Query 492 AGGTGGGAACC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTG 549 |||| || || || || || |||| |||||||||| |||||||||||||||||||||| Sbjct 453813 AGGTTGGGGCCTCGCAAGAGGNGCACAATCGACCGATNCTGATGTCTTCGGATGGATTTG 453754 Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 |||||| |||||||||||||||||||||||| || |||| |||||||||||||| |||| Sbjct 453753 AGTAAGNGCATAGCTGTTGGGACCCGAAAGANGGNGAACNATGCCTGAATAGGGNGAAGN 453694 Query 610 CAGAGGAAACTCTGGTGGAGG 630 | |||||||||| | ||||| Sbjct 453693 CNGAGGAAACTCNNGNGGAGG 453673 Score = 437 bits (484), Expect = 4e-120 Identities = 450/590 (76%), Gaps = 15/590 (3%) Strand=Plus/Minus Query 44 CGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTG 103 || ||||||| | | ||||| | | ||| ||| | ||||||||||||| ||| Sbjct 463399 CGNGTTGTTTNNGNNTNNNGCTCTNNGTNGNNGGTNNATTCCATCTAAAGCTAAATNTTG 463340 Query 104 GCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAG 163 || | |||||||||||| ||||||| || ||| ||||||||||||| |||||| |||||| Sbjct 463339 GCGANAGACCGATAGCGAACAAGTACAGNGATGGAAAGATGAAAAGAACTTTGAAAAGAG 463280 Query 164 AGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGT 223 ||| |||||| ||||||||||||||||||||||| || | | ||||| || Sbjct 463279 AGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTG 463220 Query 224 TGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCT 278 ||| | | || ||| | | | | | ||| | ||| |||||||||||| | Sbjct 463219 TGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTT 463163 Query 279 CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGG 338 || || ||||||| || ||||||| || | |||| || |||||||| | | Sbjct 463162 TTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTG 463104 Query 339 GTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATG 396 | |||| | ||| || ||||||||| | ||| | | | ||||||||||| ||||| Sbjct 463103 G--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATG 463046 Query 397 GTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTG 456 ||| || || |||||||||| |||||||||||||||||||||| |||||||||| ||||| Sbjct 463045 GTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGNGTTTG 462986 Query 457 GGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCA 514 ||||| |||||| | ||||||||||||||||||| ||| |||| | || || || || Sbjct 462985 GGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCN 462926 Query 515 CCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCC 574 | |||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct 462925 CAATCGNCCGATCCTGATGTCTTCGGATGGATTTGAGNAAGAGCATAGCTNTTGGGACCC 462866 Query 575 GAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 | ||||||| |||||||||||||||||| | | |||| || | | |||| Sbjct 462865 GNAAGATGGNNAACTATGCCTGAATAGGGNGNANCCAGNGGNANCNCTGG 462816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350