Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671085.1_202016-06- 20] 17 sequences; 12,126,160 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq12 767 0.0 >seq12 Length=1077202 Score = 767 bits (850), Expect = 0.0 Identities = 498/541 (92%), Gaps = 9/541 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 460972 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 461031 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 461032 GTTTAACAGATGTNCCGCCCCAGCCAAACTCCCCNCCTGACAATGTCTTCAACCCGGATC 461091 Query 127 GGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183 |||| |||| ||||||| || || |||| ||| |||| |||| |||||||||| Sbjct 461092 AGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCAT 461150 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 ||| |||||||| |||| |||| ||||||||||||||||| |||||||| |||||||| Sbjct 461151 TGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCAC 461207 Query 244 TTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||||||| ||||| | ||| ||||||| ||| ||||||||||||||||||||||| Sbjct 461208 TTATTCTACNCCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGT 461266 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 461267 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 461326 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 461327 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 461386 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 461387 CATTTGGCTACCTTAAGAGAGTCATAGTTNCTCCCGCCGTTTACCCGCGCTTGGTTGAAT 461446 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 461447 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 461506 Query 543 G 543 | Sbjct 461507 G 461507 Score = 753 bits (834), Expect = 0.0 Identities = 494/541 (91%), Gaps = 9/541 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 451835 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 451894 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 451895 GTTTAACAGATGTGCCGCCCCAGCCAAACNCCCCACCTGACAATGTCTTCAACCCGGATC 451954 Query 127 GGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183 |||| |||| ||||||| || || |||| ||| |||| |||| |||||||||| Sbjct 451955 AGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCAT 452013 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 ||| |||||||| |||| |||| || |||| |||||| || |||||||| |||||| | Sbjct 452014 TGAATAAGTAAAGAAACTATAAAGGNAGTGNTATTTCNCTGGCGCCGAA---GCTCCCNC 452070 Query 244 TTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||||||| || ||| | ||| ||||| | ||| ||||||||||||||||||||||| Sbjct 452071 TTATTCTACNCC-CTCTATGTCTCTTCACNATGTCAAACTAGAGTCAAGCTCAACAGGGT 452129 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 452130 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 452189 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 452190 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 452249 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 452250 CATTTGGCTACCTTAAGAGAGTCATAGTTNCTCCCGCCGTTTACCCGCGCTTGGTTGAAT 452309 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 452310 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 452369 Query 543 G 543 | Sbjct 452370 G 452370 Score = 138 bits (152), Expect = 4e-30 Identities = 87/94 (93%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 489803 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 489862 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 ||||||||||||||||| ||||||||||||| || Sbjct 489863 GTTTAACAGATGTGCCGTCCCAGCCAAACTCTCC 489896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199722016