Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671115.1_202016-06- 20] 17 sequences; 12,125,340 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 356 1e-95 >seq12 Length=1077859 Score = 356 bits (394), Expect = 1e-95 Identities = 392/521 (75%), Gaps = 15/521 (3%) Strand=Plus/Minus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 ||||| ||| |||||||| | | || |||| ||||| | |||||| |||||||||| Sbjct 454862 TCTAANNCTANATATTGGCNNGNGNCCNATAGNNAACAAGNACAGTGATGGAAAGATGAA 454803 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 454802 AAGAACTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 454743 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 454742 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 454686 Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 454685 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 454627 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | Sbjct 454626 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 454569 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 454568 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 454509 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498 ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 454508 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 454449 Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 | || || || || | | ||||||||||||||||||||||||||||||||||||||| Sbjct 454448 GCCTCGCAAGAGGNGCNCAANCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 454389 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598 |||| ||| ||||||| || | | || || | | || | || Sbjct 454388 CATANCTGNTGGGACCNGANANANGGNGANCNANGCNTNAA 454348 Score = 288 bits (318), Expect = 4e-75 Identities = 346/467 (74%), Gaps = 15/467 (3%) Strand=Plus/Minus Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||||| || ||||||||| |||| | || ||| ||||||||||||| |||||| || Sbjct 463986 ATTGGCNNNAGNCCGATAGCGAACAANNACAGNGATGGAAAGATGAAAAGAACTTTGAAA 463927 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219 |||||| |||||| ||||||||||||||||||||||| || | | ||||| || Sbjct 463926 AGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGT 463867 Query 220 CAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATC 274 ||| | | || ||| | | | | | ||| | ||| |||||||||| Sbjct 463866 TTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATC 463810 Query 275 AGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCC 334 || | || || ||||||| || ||||||| || | |||| || |||||||| Sbjct 463809 AGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCC 463751 Query 335 CGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGT 392 | || |||| | ||| || ||||||||| | ||| | | | ||||||||||| | Sbjct 463750 TGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCAT 463693 Query 393 AATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTG 452 ||||||| || || |||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 463692 AATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTG 463633 Query 453 TTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GG 510 ||||||||| |||||| | ||||||||||||||||||| ||| |||| | || || || Sbjct 463632 TTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGG 463573 Query 511 TGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 |||| ||||||||| |||||||| || || | | || |||||| Sbjct 463572 NGCACAATCGACCGANCCTGATGTNTTNGGNTNGNTTNNNNTAAGAG 463526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350