Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671115.1_202016-06-
20] 17 sequences; 12,125,340 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq12 196 8e-48
>seq12
Length=1077859
Score = 196 bits (216), Expect = 8e-48
Identities = 223/293 (76%), Gaps = 18/293 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 461291 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 461234
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 461233 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 461174
Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169
||||| ||||| |||| | || |||| ||| |||||||||| |||| |
Sbjct 461173 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 461114
Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
|| | | ||||| |||||||| ||||||| || |||||| || ||| |||
Sbjct 461113 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT- 461055
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| || ||||| ||| |||| | | || |||| | |||||
Sbjct 461054 TGCTGGCGAATNGCAATGTCATTTTGCGNGGNNNNANNTCATTTGTATACGAC 461002
Score = 190 bits (210), Expect = 3e-46
Identities = 172/211 (82%), Gaps = 14/211 (7%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 452154 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 452097
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 452096 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 452037
Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169
||||| ||||| |||| | || |||| ||| |||||||||| |||| |
Sbjct 452036 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 451977
Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG 199
|| | | ||||| |||||||| |||||||
Sbjct 451976 GCGTCGCTGAACCATAGCAGGCTAGCAACGG 451946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199865088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |