Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671165.1_202016-06- 20] 17 sequences; 12,120,079 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 441 3e-121 >seq12 Length=1077614 Score = 441 bits (488), Expect = 3e-121 Identities = 428/545 (79%), Gaps = 15/545 (3%) Strand=Plus/Minus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 ||||||||||||| ||||| |||||||||||||| ||||| | |||||| ||||||||| Sbjct 454654 TCTAAAGCTAAATNTTGGCGAGAGACCGATAGCGAACAAGNACAGTGATGNAAAGATGAA 454595 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 454594 AAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 454535 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 454534 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 454478 Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 454477 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 454419 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | Sbjct 454418 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 454361 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 454360 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 454301 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 ||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| || Sbjct 454300 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 454241 Query 500 ACC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 || || || || |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct 454240 GCCTCGCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGNGTAAGAG 454181 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 ||||||||||||||||||| |||||| ||||||||||||||||||| |||| ||| || | Sbjct 454180 CATAGCTGTTGGGACCCGANAGATGGNGAACTATGCCTGAATAGGGNGAAGNCAGNGGNA 454121 Query 618 ACTCT 622 | || Sbjct 454120 NCNCT 454116 Score = 401 bits (444), Expect = 3e-109 Identities = 413/538 (77%), Gaps = 15/538 (3%) Strand=Plus/Minus Query 109 AGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTA 168 || ||||||||| ||||||| |||||| ||||||||||||| |||||| |||||||| | Sbjct 463769 AGNCCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGA 463710 Query 169 AAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTC 228 ||||| ||||||||||||||||||||||| || | | ||||| || ||| | Sbjct 463709 AAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCC 463650 Query 229 AACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGC 283 | || ||| | | | | | ||| | ||| |||||||||||| | || Sbjct 463649 T--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGT 463593 Query 284 GGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGA 343 || ||||||| || ||||||| || | |||| || |||||||| | || || Sbjct 463592 GGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GA 463536 Query 344 ATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGT 401 || | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| | Sbjct 463535 ATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTAT 463476 Query 402 AAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT 461 | || |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 463475 ATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGT 463416 Query 462 CAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATC 519 |||||| | ||||||||||||||||||| ||| |||| | || || || |||| ||| Sbjct 463415 AAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAATC 463356 Query 520 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579 | ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| Sbjct 463355 GNCCGATCCTGATGTCTTCGGNTGGNTTTGAGTAAGAGCATAGCTGTTGGGNCCCGAAAG 463296 Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| |||||| ||| |||| ||| ||| | || ||||| || || |||| | || Sbjct 463295 ATGGNGAACTANGCCNGAATNGGGNGAANCNNNNGGNAACTCNGGNGGNGGCTNGNAG 463238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350