Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671165.1_202016-06-
20] 17 sequences; 12,120,079 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 441 3e-121
>seq12
Length=1077614
Score = 441 bits (488), Expect = 3e-121
Identities = 428/545 (79%), Gaps = 15/545 (3%)
Strand=Plus/Minus
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
||||||||||||| ||||| |||||||||||||| ||||| | |||||| |||||||||
Sbjct 454654 TCTAAAGCTAAATNTTGGCGAGAGACCGATAGCGAACAAGNACAGTGATGNAAAGATGAA 454595
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | |
Sbjct 454594 AAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 454535
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264
||||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 454534 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 454478
Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 454477 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 454419
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | |
Sbjct 454418 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 454361
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||| |||||||| || || |||||||||| ||||||||||||||||||||||
Sbjct 454360 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 454301
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| ||
Sbjct 454300 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 454241
Query 500 ACC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557
|| || || || |||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct 454240 GCCTCGCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGNGTAAGAG 454181
Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
||||||||||||||||||| |||||| ||||||||||||||||||| |||| ||| || |
Sbjct 454180 CATAGCTGTTGGGACCCGANAGATGGNGAACTATGCCTGAATAGGGNGAAGNCAGNGGNA 454121
Query 618 ACTCT 622
| ||
Sbjct 454120 NCNCT 454116
Score = 401 bits (444), Expect = 3e-109
Identities = 413/538 (77%), Gaps = 15/538 (3%)
Strand=Plus/Minus
Query 109 AGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTA 168
|| ||||||||| ||||||| |||||| ||||||||||||| |||||| |||||||| |
Sbjct 463769 AGNCCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGA 463710
Query 169 AAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTC 228
||||| ||||||||||||||||||||||| || | | ||||| || ||| |
Sbjct 463709 AAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCC 463650
Query 229 AACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGC 283
| || ||| | | | | | ||| | ||| |||||||||||| | ||
Sbjct 463649 T--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGT 463593
Query 284 GGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGA 343
|| ||||||| || ||||||| || | |||| || |||||||| | || ||
Sbjct 463592 GGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GA 463536
Query 344 ATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGT 401
|| | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| |
Sbjct 463535 ATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTAT 463476
Query 402 AAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT 461
| || |||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct 463475 ATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGT 463416
Query 462 CAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATC 519
|||||| | ||||||||||||||||||| ||| |||| | || || || |||| |||
Sbjct 463415 AAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAATC 463356
Query 520 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579
| ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||
Sbjct 463355 GNCCGATCCTGATGTCTTCGGNTGGNTTTGAGTAAGAGCATAGCTGTTGGGNCCCGAAAG 463296
Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| |||||| ||| |||| ||| ||| | || ||||| || || |||| | ||
Sbjct 463295 ATGGNGAACTANGCCNGAATNGGGNGAANCNNNNGGNAACTCNGGNGGNGGCTNGNAG 463238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |