Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671195.1_202016-06- 20] 17 sequences; 12,121,199 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 435 1e-119 >seq12 Length=1076686 Score = 435 bits (482), Expect = 1e-119 Identities = 444/579 (77%), Gaps = 15/579 (3%) Strand=Plus/Minus Query 45 GAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGG 104 ||||| | | |||| |||| || || |||| | |||| |||||||||||| Sbjct 463000 GAGTTNNNTNGNNATGCNNNTCTANGNGGNNGGNAAATNCCANCTAANGCTAAATATTGG 462941 Query 105 CCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGA 164 | |||||||||||||| ||||||| |||||| ||||||||||||| |||||| ||||||| Sbjct 462940 CGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGA 462881 Query 165 GTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTT 224 || |||||| ||||||||||||||||||||||| || | | ||||| || | Sbjct 462880 GTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGT 462821 Query 225 GCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTC 279 || | | || ||| | | | | | ||| | ||| |||||||||||| | Sbjct 462820 GCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTT 462764 Query 280 GGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGG 339 || || ||||||| || ||||||| || | |||| || |||||||| | || Sbjct 462763 TGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG 462705 Query 340 TGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGG 397 |||| | ||| || ||||||||| | ||| | | | ||||||||||| |||||| Sbjct 462704 --GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGG 462647 Query 398 TTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGG 457 || || || |||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 462646 TTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGG 462587 Query 458 GTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCAC 515 |||| |||||| | ||||||||||||||||||| ||| |||| | || || || |||| Sbjct 462586 GTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCAC 462527 Query 516 CATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCG 575 |||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||| || Sbjct 462526 AATCGNCCGATCCTGATGTCTTCGGATGGNTTTGAGTAAGAGNATAGCTGTTNGGACNCG 462467 Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||| |||||||||| |||||||| |||||| || Sbjct 462466 AAAGATGNNGAACTATGCCNGAATAGGGNNAAGCCANAG 462428 Score = 396 bits (438), Expect = 1e-107 Identities = 430/573 (75%), Gaps = 15/573 (3%) Strand=Plus/Minus Query 45 GAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGG 104 |||||||| | ||| | ||| || | || | | | ||||||||||||| || Sbjct 453863 GAGTTGTTNGNGAANGNNGCTNTANGNNNNNGNTANANTCCANNTAAAGCTAAATATNGG 453804 Query 105 CCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGA 164 |||||||||||||| ||||||| || ||| ||||||||||||| |||||| ||||||| Sbjct 453803 NGAGAGACCGATAGCGAACAAGTACAGNGATGGAAAGATGAAAAGAACTTTGAAAAGAGA 453744 Query 165 GTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTT 224 | |||||| ||||||||||||||||||||||| || | | ||||| || | Sbjct 453743 GNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGT 453684 Query 225 GCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTC 279 || | | || ||| | | | | | ||| | ||| |||||||||||| | Sbjct 453683 GCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTT 453627 Query 280 GGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGG 339 || || ||||||| || ||||||| || | |||| || |||||||| | || Sbjct 453626 TGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG 453568 Query 340 TGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGG 397 |||| | ||| || ||||||||| | ||| | | | ||||||||||| |||||| Sbjct 453567 --GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGG 453510 Query 398 TTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGG 457 || || || |||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 453509 TTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGG 453450 Query 458 GTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCAC 515 |||| |||||| | ||||||||||||||||||| ||| |||| | || || || |||| Sbjct 453449 GTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCAC 453390 Query 516 CATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCG 575 |||||||||||||||||||||||||||| ||||||| |||| || ||||||| | | || Sbjct 453389 AATCGACCGATCCTGATGTCTTCGGATGGNTTTGAGTNAGAGNATNGCTGTTGNGNCNCG 453330 Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 |||||||| ||| |||| || | |||| | || Sbjct 453329 AAAGATGGNGAANNATGCNTGNANAGGGNGNAG 453297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350