Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671195.1_202016-06- 20] 17 sequences; 12,121,199 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq12 250 4e-64 >seq12 Length=1076686 Score = 250 bits (276), Expect = 4e-64 Identities = 191/226 (85%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 455197 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 455256 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCA 118 |||||||||||||||||||||||| |||| ||| || |||||||||||||||| | | Sbjct 455257 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 455316 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| || | | |||||||| |||||||||||||||||||||||| ||| Sbjct 455317 ACCAGCAA--ATGCTAG-CACCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 455373 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACC 224 ||| |||||||||| ||| |||||||||| ||| ||| | || || Sbjct 455374 TAAGCAGACAAATCNCTCNACCAACTAAGNNCGGNCATNCNCCNCC 455419 Score = 233 bits (258), Expect = 3e-59 Identities = 182/217 (84%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 464334 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 464393 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCA 118 |||||||||||||||||||||||| |||| ||| || |||||||||||||||| | | Sbjct 464394 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 464453 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| || | | |||||||| |||||||||||||||||||||||| ||| Sbjct 464454 ACCAGCAA--ATGCTAG-CACCACTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 464510 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCA 215 ||| ||||||||| | | ||||| |||| || ||| Sbjct 464511 TAANCAGACAAATNNCNCNACCAANNAAGANCGNCCA 464547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799868777