Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671195.1_202016-06- 20] 17 sequences; 12,121,199 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq12 684 0.0 >seq12 Length=1076686 Score = 684 bits (758), Expect = 0.0 Identities = 457/508 (90%), Gaps = 6/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||| ||| | |||||||||||| ||| Sbjct 465304 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGNATCGTTNTTTATTGTCACTNCCT 465363 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || | | ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 465364 CCNTGNATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCNTT 465423 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||| Sbjct 465424 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATNCCCCGTTACCCGTTGAAACCATGGTA 465483 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||| |||| | ||||| | |||||| |||||||||| || Sbjct 465484 GGCCNCTATCCTACCATCGAAAGNTGATNGNGCAGANANTTGAATNAACCATCGCCAGCA 465543 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| | Sbjct 465544 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-NCCGAA-GACATTGAT 465601 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||| | ||||| || |||| | |||| |||||||||||||||| Sbjct 465602 TTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCT 465661 Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct 465662 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 465721 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct 465722 ATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTNAGACATGCATGGCTTAATC 465781 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 465782 TTTGAGACAAGCATATGACTACTGGCAG 465809 Score = 650 bits (720), Expect = 0.0 Identities = 448/508 (88%), Gaps = 6/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| ||||||||||| || || Sbjct 456167 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCNCTNCCN 456226 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || | | ||||||||| |||||||||||||||| ||||||||| || ||| ||||| Sbjct 456227 NCCTGAATNAGGATTGGGTNATTTGCGCGCCTGCTGNCTTCCTTGGNTGNNGTANCCGTT 456286 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||| |||| ||||| |||||||||| ||||||||||||| ||||| ||| |||| Sbjct 456287 TCTCAGGCNCCCTNTCCGGNATCGAACCCTTATTCCCCGTTACCNGTTGAAACCNTGGTN 456346 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||| || || ||||||||||||||| |||||||||||||||||||| || Sbjct 456347 GGCCNCTATCCNNCCNNCGNAAGTTGATAGGGCAGNAATTTGAATGAACCATCGCCAGCA 456406 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| | Sbjct 456407 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGAT 456464 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||| | ||||| || |||| | |||| |||||||||||||||| Sbjct 456465 TTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCT 456524 Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct 456525 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 456584 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 456585 ATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATC 456644 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 456645 TTTGAGACAAGCATATGACTACTGGCAG 456672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399743232