Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671225.1_202016-06- 20] 17 sequences; 12,090,979 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 459 1e-126 >seq12 Length=1076845 Score = 459 bits (508), Expect = 1e-126 Identities = 460/598 (77%), Gaps = 15/598 (3%) Strand=Plus/Minus Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91 ||| ||| | | |||||||| || || || ||||||| || || | || | |||| Sbjct 463073 CCTNCGAAGNGNCGAGTTGTNTGNNAANGCNGCTCTAAGNNGGNGGNNANTTCCNNCTAA 463014 Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151 | ||||||||| || | ||||||||||| ||||||| |||||| ||||||||||||| | Sbjct 463013 ANCTAAATATTNGCGNGNGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAA 462954 Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGA 211 ||||| ||||||||| |||||| ||||||||||||||||||||||| || | | |||| Sbjct 462953 CTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGA 462894 Query 212 CTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GG 266 | || ||| | | || ||| | | | | | ||| | ||| || Sbjct 462893 CATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGG 462837 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 |||||||||| | || || ||||||| || ||||||| || | |||| || Sbjct 462836 CCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTA 462778 Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGAT 384 |||||||| | || |||| | ||| || ||||||||| | ||| | | | ||||| Sbjct 462777 TTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGAT 462720 Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444 |||||| |||||||| || || |||||||||| |||||||||||||||||||||| |||| Sbjct 462719 GCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTA 462660 Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCC 503 ||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | | Sbjct 462659 TGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTC 462600 Query 504 GTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 | || || |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 462599 GCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 462540 Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620 |||||||| |||||||| ||| || | || ||||||||| ||||| |||| ||||| Sbjct 462539 CTGTTGGGNCCCGAAAGNTGGNGANCNNNGCNTGAATAGGGNGAAGCNAGAGNAAACT 462482 Score = 441 bits (488), Expect = 3e-121 Identities = 448/583 (77%), Gaps = 15/583 (3%) Strand=Plus/Minus Query 24 GTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATT 83 || ||| || || | | || |||||| ||||| | ||||||| ||| |||| ||| Sbjct 453944 GTAAAGNNNCTNCGNAGNGNCGNGTTGTTNGGGAANGNAGCTCTANGNGGGNGGTANATT 453885 Query 84 TCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT 143 | ||||| |||||||||||| ||||||||| |||| ||||||| |||||| ||||||| Sbjct 453884 CCATCTAANGCTAAATATTGGNGAGAGACCGANAGCGNACAAGTACAGTGATGGAAAGAT 453825 Query 144 GAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 |||||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | Sbjct 453824 GAAAAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATT 453765 Query 204 CAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGG 261 | ||||| || ||| | | || ||| | | | | | ||| | Sbjct 453764 TGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATT 453708 Query 262 TCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 ||| |||||||||||| | || || ||||||| || ||||||| || | || Sbjct 453707 TCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTC 453649 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCG 376 || || |||||||| | || |||| | ||| || ||||||||| | ||| | | Sbjct 453648 GGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAG 453591 Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436 | ||||||||||| |||||||| || || |||||||||| ||||||||||||||||||| Sbjct 453590 TCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCT 453531 Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-T 495 ||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| | Sbjct 453530 AACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTT 453471 Query 496 GGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAA 554 ||| | || || || |||| |||||||||||||||||||||||||||||||||||||| Sbjct 453470 GGGGCCTCGCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAA 453411 Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 597 | |||||||||||||| |||||||| || |||||| ||| || Sbjct 453410 GNGCATAGCTGTTGGGNCCCGAAAGNTGNNGAACTANGCCNGA 453368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350