Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671225.1_202016-06- 20] 17 sequences; 12,090,979 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq12 699 0.0 >seq12 Length=1076845 Score = 699 bits (774), Expect = 0.0 Identities = 461/508 (91%), Gaps = 6/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | ||||||| || |||||| |||| || ||| Sbjct 465364 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTNTCNTTATTTANTGTCNCTNCCT 465423 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | | |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 465424 CCCNGAATTAGGATTGGGTAATTTNCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 465483 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||| ||||||||||| |||| |||||||| ||||||||||||||||||| ||| ||||| Sbjct 465484 TCTCNGGCTCCCTCTCNGGAANCGAACCCTTATTCCCCGTTACCCGTTGAAACCNTGGTA 465543 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct 465544 GGCCACTATCCTNCCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 465603 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| | Sbjct 465604 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGAT 465661 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||| | ||||| || |||| | |||| |||||||||||||||| Sbjct 465662 TTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCT 465721 Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct 465722 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 465781 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 465782 ATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATC 465841 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 465842 TTTGAGACAAGCATATGACTACTGGCAG 465869 Score = 646 bits (716), Expect = 0.0 Identities = 447/508 (88%), Gaps = 6/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||| |||| ||| || | ||||| || | ||| | || | || | Sbjct 456227 GTACTCATTCCAATNACAANNCCCGAATGGGCCCTNTANCGTTATNTNTTNTNNCTNNCN 456286 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || | || |||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 456287 CCNTGAANTAGGNNTGGGTAATTTGCGCGCCTGCTGCCTTCCNTGGATNTGGTAGCCGTN 456346 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||| || ||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct 456347 TCTCAGGCTNCCNCTCCGGAATCGAACCCTTATTCCCCGTTNCCCGTTGAANCCATGGTA 456406 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 456407 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 456466 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| | Sbjct 456467 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGAT 456524 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||| | ||||| || |||| | |||| |||||||||||||||| Sbjct 456525 TTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCT 456584 Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct 456585 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 456644 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 456645 ATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATC 456704 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 456705 TTTGAGACAAGCATATGACTACTGGCAG 456732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399743232