Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671285.1_202016-06- 20] 17 sequences; 12,122,800 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 480 3e-133 >seq12 Length=1077822 Score = 480 bits (532), Expect = 3e-133 Identities = 467/600 (78%), Gaps = 15/600 (3%) Strand=Plus/Minus Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91 ||||||| ||| |||| || || | || | ||| || | ||||| | |||| Sbjct 464056 CCTTCGAAGAGNNNAGTTNTTNGGNANTGNANNTCTNNNNNGGNGNNAAATTCCATCTAN 463997 Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151 |||| ||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| | Sbjct 463996 AGCTNAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAA 463937 Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGA 211 ||||| ||||||||| |||||| ||||||||||||||||||||||| || | | |||| Sbjct 463936 CTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGA 463877 Query 212 CTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GG 266 | || ||| | | || ||| | | | | | ||| | ||| || Sbjct 463876 CATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGG 463820 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 |||||||||| | || || ||||||| || ||||||| || | |||| || Sbjct 463819 CCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTA 463761 Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGAT 384 |||| ||| | || |||| | ||| || ||||||||| | ||| | | | ||||| Sbjct 463760 TTATNGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGAT 463703 Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444 |||||| |||||||| || || |||||||||| |||||||||||||||||||||| |||| Sbjct 463702 GCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTA 463643 Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC-C 503 ||||||||||||||||| |||||| | ||||||||||||||||||| |||| || || | Sbjct 463642 TGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTC 463583 Query 504 GTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 | || || |||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 463582 GCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGANCATAG 463523 Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| Sbjct 463522 CTGTTNGGACCCGAAAGATGGNGAACTATGCCTGAATAGGGNGAAGCCAGAGGAANCTCT 463463 Score = 477 bits (528), Expect = 4e-132 Identities = 464/596 (78%), Gaps = 15/596 (3%) Strand=Plus/Minus Query 33 CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAA 92 ||| || |||| ||| ||| |||| ||| | ||| || | || | | | | |||| | Sbjct 454918 CTTNGAAGAGTNGAGNTGTNTGGGNATGNNGNTCTNNNTGNGNGGNANANTCCATCTANA 454859 Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152 ||||||||||||| | ||||||||||| ||||||| |||||| ||||||||||||| || Sbjct 454858 GCTAAATATTGGCGNGNGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAAC 454799 Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC 212 |||| ||||||||| |||||| ||||||||||||||||||||||| || | | ||||| Sbjct 454798 TTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGAC 454739 Query 213 TTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGC 267 || ||| | | || ||| | | | | | ||| | ||| ||| Sbjct 454738 ATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGC 454682 Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327 ||||||||| | || || ||||||| || ||||||| || | |||| || | Sbjct 454681 CAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTAT 454623 Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATG 385 ||||||| | || |||| | ||| || ||||||||| | ||| | | | |||||| Sbjct 454622 TATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATG 454565 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 ||||| |||||||| || || |||||||||| |||||||||||||||||||||| ||||| Sbjct 454564 CTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTAT 454505 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC-CG 504 |||||||||||||||| |||||| | ||||||||||||||||||| |||| || || || Sbjct 454504 GCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCG 454445 Query 505 TGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGC 563 || || |||| |||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 454444 CAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGATNGATTTGAGTAAGAGCNTAGC 454385 Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619 ||||||| |||||||||||| ||||||||||||||||||| |||||||||| |||| Sbjct 454384 TGTTGGGNCCCGAAAGATGGNGAACTATGCCTGAATAGGGNGAAGCCAGAGNAAAC 454329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350