Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671315.1_202016-06-
20] 17 sequences; 12,125,002 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq12 206 4e-51
>seq12
Length=1077585
Score = 206 bits (228), Expect = 4e-51
Identities = 226/293 (77%), Gaps = 18/293 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 451911 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 451854
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 451853 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 451794
Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169
||||| ||||| |||| | || |||| ||| |||||||||| |||| |
Sbjct 451793 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 451734
Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
|| | | ||||| |||||||| ||||||| || |||||| || || |||
Sbjct 451733 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGNNGCT- 451675
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
| ||||| |||||| | || |||| |||||||||| |||| | |||||
Sbjct 451674 TGNTGGCGAATTGCANTGNCATTTTGCGTGGGGATAAATCATTTGTATACGAC 451622
Score = 197 bits (218), Expect = 2e-48
Identities = 223/293 (76%), Gaps = 18/293 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 461048 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 460991
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 460990 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 460931
Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169
||||| ||||| |||| | || |||| ||| |||||||||| |||| |
Sbjct 460930 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 460871
Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
|| | | ||||| |||||||| ||||||| || |||||| || || ||
Sbjct 460870 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTNGGNGC-N 460812
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| ||| | | || ||| |||||||||| |||| | |||||
Sbjct 460811 NGCTGGCGAATTNNANTGTCNTTTNGCGTGGGGATAAATCATTTGTATACGAC 460759
Score = 100 bits (110), Expect = 5e-19
Identities = 74/84 (88%), Gaps = 2/84 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 489879 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 489822
Query 61 GCCGCGAAGCTACCATCTGCTGGA 84
||||||||||||||||| ||||||
Sbjct 489821 GCCGCGAAGCTACCATCCGCTGGA 489798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199865088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |