Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671315.1_202016-06- 20] 17 sequences; 12,125,002 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq12 664 0.0 >seq12 Length=1077585 Score = 664 bits (736), Expect = 0.0 Identities = 451/508 (89%), Gaps = 6/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||| ||| || | |||||||||| ||||||||||| || ||| Sbjct 466102 GTACTCATTCCAATTACAAGNCCCGAATGGGCCCTGTATCGTTATTTATTGTCNCTNCCT 466161 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | | ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 466162 CCCNGNATTANGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTNGATGTGGTAGCCGTT 466221 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||| ||||||||||||||||| || || |||||| ||||||||| ||||||||| Sbjct 466222 TCTCAGGCNCCCTCTCCGGAATCGAANNCTTATNCCCCGTNACCCGTTGAAACCATGGTA 466281 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||| | ||||||||||||||||||||||| |||| || Sbjct 466282 GGCCNNTATCCTACCATCGAAAGNTNNNAGGGCAGAAATTTGAATGAACCANCGCCAGCN 466341 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| | Sbjct 466342 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-NCCGAA-GACATTGAT 466399 Query 301 TTTTTATCTAATAAATACACCCCTTCCGA--AGTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||| | || || | |||| | |||| |||||| ||||||||| Sbjct 466400 TTTTTATCTAATAAATACATCTCTNCCAANGNGTCGAGATTTTAAGCATGNATTAGCTCT 466459 Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct 466460 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 466519 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 466520 ATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATC 466579 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 466580 TTTGAGACAAGCATATGACTACTGGCAG 466607 Score = 657 bits (728), Expect = 0.0 Identities = 450/508 (89%), Gaps = 6/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| |||||||||||||| | Sbjct 456965 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTNNCN 457024 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | | ||| |||||||||||| ||||||||| | || || || || |||||||| Sbjct 457025 CCCTGAATTNGGANTGGGTAATTTGCNCGCCTGCTGNCNTCNTTNNATNTGNTAGCCGTT 457084 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||| |||||||||| |||||||||||||| || ||||||||||||||| ||||||||| Sbjct 457085 TCTCNGGCTCCCTCTNCGGAATCGAACCCTTATNNCCCGTTACCCGTTGAAACCATGGTA 457144 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||| || |||||||||||||||| |||||| || Sbjct 457145 GGCCACTATCCTACCATCGAAAGTTGATANGGNAGAAATTTGAATGAACNATCGCCAGCA 457204 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| | Sbjct 457205 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGAT 457262 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||| | ||||| || |||| | |||| |||||||||||||||| Sbjct 457263 TTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCT 457322 Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct 457323 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 457382 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct 457383 ATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACNTAGACATGNATGGCTTAATC 457442 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 457443 TTTGAGACAAGCATATGACTACTGGCAG 457470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399743232