Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671345.1_202016-06- 20] 17 sequences; 12,115,126 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq12 376 5e-102 >seq12 Length=1077090 Score = 376 bits (416), Expect = 5e-102 Identities = 268/303 (88%), Gaps = 6/303 (2%) Strand=Plus/Minus Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74 |||||||||||||||| | || | |||| ||| | | || || ||||||||| Sbjct 465885 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGCGAACCAGGACTT 465830 Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGA 133 |||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| Sbjct 465829 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGA 465770 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 465769 ATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAA 465710 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 465709 TAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 465650 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||| Sbjct 465649 AGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTT 465591 Query 314 AGG 316 ||| Sbjct 465590 AGG 465588 Score = 338 bits (374), Expect = 1e-90 Identities = 245/282 (87%), Gaps = 5/282 (2%) Strand=Plus/Minus Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74 |||||||||||||||| | || | |||| ||| | | || || ||||||||| Sbjct 456748 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGCGAACCAGGACTT 456693 Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGA 133 |||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| Sbjct 456692 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGA 456633 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 456632 ATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAA 456573 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 456572 TAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 456513 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATT 295 |||||||||||||||||| | | |||||| ||||| ||| Sbjct 456512 AGACTAACTACTGCGAAANCANTTNNCAAGGACGTTTTNATT 456471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199844416