Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671345.1_202016-06- 20] 17 sequences; 12,115,126 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 338 3e-90 >seq12 Length=1077090 Score = 338 bits (374), Expect = 3e-90 Identities = 387/519 (75%), Gaps = 15/519 (3%) Strand=Plus/Minus Query 24 GTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATT 83 || ||| || |||| | | ||||| ||| ||||||| ||| ||| || | ||||| Sbjct 463771 GTAAAGNNCCNTCGAAGNGNCGAGTNGTTNGGGAATGNAGCNNTAAGTGNGNNNNAAATT 463712 Query 84 TCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT 143 |||||||||||||||||| |||| ||||||||| ||||||| || ||| ||||||| Sbjct 463711 NNANCTAAAGCTAAATATTGGCGAGAGNCCGATAGCGAACAAGTACAGNGATGGAAAGAT 463652 Query 144 GAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 |||||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | Sbjct 463651 GAAAAGAACTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATT 463592 Query 204 CAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGG 261 | ||||| || ||| | | || ||| | | | | | ||| | Sbjct 463591 TGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATT 463535 Query 262 TCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 ||| |||||||||||| | || || ||||||| || ||||||| || | || Sbjct 463534 TCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTC 463476 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCG 376 || || |||||||| | || |||| | ||| || ||||||||| | ||| | | Sbjct 463475 GGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAG 463418 Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436 | ||||||||||| |||||||| || || |||||||||| ||||||||||||||||||| Sbjct 463417 TCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCT 463358 Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-T 495 ||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| | Sbjct 463357 AACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTT 463298 Query 496 GGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATG 533 ||| | || || || |||| |||| |||| || |||| Sbjct 463297 GGGGCCTCGCAAGAGGNGCACAATCGNCCGANCCNGATG 463259 Score = 284 bits (314), Expect = 5e-74 Identities = 347/471 (74%), Gaps = 15/471 (3%) Strand=Plus/Minus Query 91 AAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGC 150 || |||||| ||| || | ||||||| | |||| | | |||| |||||||||| || Sbjct 454567 AANCTAAATNNTGGNGAGNGNCCGATAGNGANCAAGNACANTGATNGAAAGATGAANAGN 454508 Query 151 ACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAG 210 |||||| |||||||| |||||| ||||||||||||||||||||||| || | | ||| Sbjct 454507 ACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAG 454448 Query 211 ACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---G 265 || || ||| | | || ||| | | | | | ||| | ||| | Sbjct 454447 ACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGG 454391 Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325 ||||||||||| | || || ||||||| || ||||||| || | |||| || Sbjct 454390 GCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGT 454332 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGA 383 |||||||| | || |||| | ||| || ||||||||| | ||| | | | |||| Sbjct 454331 ATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGA 454274 Query 384 TGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCT 443 ||||||| |||||||| || || |||||||||| |||||||||||||||||||||| ||| Sbjct 454273 TGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCT 454214 Query 444 ATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACC 502 |||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | Sbjct 454213 ATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCT 454154 Query 503 CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 552 || || || |||| ||||||||||||||||| | ||| || | | ||| Sbjct 454153 CGCAAGAGGNGCACAATCGACCGATCCTGATGNNTNNGGANGGNTNTNAGT 454103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350