Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671375.1_202016-06-
20] 17 sequences; 12,121,198 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 349 1e-93
>seq12
Length=1077566
Score = 349 bits (386), Expect = 1e-93
Identities = 404/547 (74%), Gaps = 15/547 (3%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||| | | ||||| || ||| |||| || || || | | ||||| |||||
Sbjct 463817 GAGNNGNGNTGTTTNGGNNTGCNNCTCTNNGNNGGNGGNAANTNNCANCTAAANNTAAAT 463758
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|||||| ||||||| |||||| ||||| | |||||| ||||||||||||| |||||| ||
Sbjct 463757 ATTGGCGAGAGACCNATAGCGAACAAGNACAGTGATGGAAAGATGAAAAGAACTTTGAAA 463698
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219
|||||| |||||| ||||||||||||||||||||||| || | | ||||| ||
Sbjct 463697 AGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGT 463638
Query 220 CAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATC 274
||| | | || ||| | | | | | ||| | ||| ||||||||||
Sbjct 463637 TTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATC 463581
Query 275 AGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCC 334
|| | || || ||||||| || ||||||| || | |||| || ||||||||
Sbjct 463580 AGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCC 463522
Query 335 CGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGT 392
| || |||| | ||| || ||||||||| | ||| | | | ||||||||||| |
Sbjct 463521 TGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCAT 463464
Query 393 AATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTG 452
||||||| || || |||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 463463 AATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTG 463404
Query 453 TTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GG 510
||||||||| |||||| | ||||||||||||||||||| ||| |||| | || || ||
Sbjct 463403 TTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGG 463344
Query 511 TGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGG 570
||| ||||||||||| ||||||||||||| | |||| | ||| |||||||| || |
Sbjct 463343 NGCANAATCGACCGATCNTGATGTCTTCGGANGNNTTTGNGNAAGNGCATAGCTNNTGNG 463284
Query 571 ACCCGAA 577
| | |||
Sbjct 463283 ANCNGAA 463277
Score = 340 bits (376), Expect = 7e-91
Identities = 373/491 (76%), Gaps = 15/491 (3%)
Strand=Plus/Minus
Query 89 TAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148
|||| |||||||||||| |||||| ||||||| ||||| | || | | ||||||||||||
Sbjct 454631 TAAANCTAAATATTGGCGAGAGACNGATAGCGAACAAGNACAGNGNTGGAAAGATGAAAA 454572
Query 149 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208
| |||||| |||||||| |||||| ||||||||||||||||||||||| || | | |
Sbjct 454571 GAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATC 454512
Query 209 AGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA-- 264
|||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 454511 AGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACT 454455
Query 265 -GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 454454 GGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAA 454396
Query 324 GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAG 381
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | | ||
Sbjct 454395 GTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAG 454338
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| |
Sbjct 454337 GATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGT 454278
Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAA 500
|||||||||||||||||||| |||||| | ||||||||||||||||||| ||| ||||
Sbjct 454277 CTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGC 454218
Query 501 CCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
| || || || |||| |||||||||||||||||||||||| | |||||||| ||| |
Sbjct 454217 CTCGCAAGAGGNGCACANTCGACCGATCCTGATGTCTTCGGANGNATTTGAGTNAGANCN 454158
Query 560 TAGCTGTTGGG 570
| || ||||||
Sbjct 454157 TNGCNGTTGGG 454147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |