Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671375.1_202016-06- 20] 17 sequences; 12,121,198 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 349 1e-93 >seq12 Length=1077566 Score = 349 bits (386), Expect = 1e-93 Identities = 404/547 (74%), Gaps = 15/547 (3%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||| | | ||||| || ||| |||| || || || | | ||||| ||||| Sbjct 463817 GAGNNGNGNTGTTTNGGNNTGCNNCTCTNNGNNGGNGGNAANTNNCANCTAAANNTAAAT 463758 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||||| ||||||| |||||| ||||| | |||||| ||||||||||||| |||||| || Sbjct 463757 ATTGGCGAGAGACCNATAGCGAACAAGNACAGTGATGGAAAGATGAAAAGAACTTTGAAA 463698 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219 |||||| |||||| ||||||||||||||||||||||| || | | ||||| || Sbjct 463697 AGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGT 463638 Query 220 CAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATC 274 ||| | | || ||| | | | | | ||| | ||| |||||||||| Sbjct 463637 TTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATC 463581 Query 275 AGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCC 334 || | || || ||||||| || ||||||| || | |||| || |||||||| Sbjct 463580 AGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCC 463522 Query 335 CGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGT 392 | || |||| | ||| || ||||||||| | ||| | | | ||||||||||| | Sbjct 463521 TGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCAT 463464 Query 393 AATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTG 452 ||||||| || || |||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 463463 AATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTG 463404 Query 453 TTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GG 510 ||||||||| |||||| | ||||||||||||||||||| ||| |||| | || || || Sbjct 463403 TTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGG 463344 Query 511 TGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGG 570 ||| ||||||||||| ||||||||||||| | |||| | ||| |||||||| || | Sbjct 463343 NGCANAATCGACCGATCNTGATGTCTTCGGANGNNTTTGNGNAAGNGCATAGCTNNTGNG 463284 Query 571 ACCCGAA 577 | | ||| Sbjct 463283 ANCNGAA 463277 Score = 340 bits (376), Expect = 7e-91 Identities = 373/491 (76%), Gaps = 15/491 (3%) Strand=Plus/Minus Query 89 TAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148 |||| |||||||||||| |||||| ||||||| ||||| | || | | |||||||||||| Sbjct 454631 TAAANCTAAATATTGGCGAGAGACNGATAGCGAACAAGNACAGNGNTGGAAAGATGAAAA 454572 Query 149 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208 | |||||| |||||||| |||||| ||||||||||||||||||||||| || | | | Sbjct 454571 GAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATC 454512 Query 209 AGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA-- 264 |||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 454511 AGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACT 454455 Query 265 -GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 454454 GGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAA 454396 Query 324 GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAG 381 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | || Sbjct 454395 GTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAG 454338 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 ||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| | Sbjct 454337 GATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGT 454278 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAA 500 |||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 454277 CTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGC 454218 Query 501 CCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 | || || || |||| |||||||||||||||||||||||| | |||||||| ||| | Sbjct 454217 CTCGCAAGAGGNGCACANTCGACCGATCCTGATGTCTTCGGANGNATTTGAGTNAGANCN 454158 Query 560 TAGCTGTTGGG 570 | || |||||| Sbjct 454157 TNGCNGTTGGG 454147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350