Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671405.1_202016-06-
20] 17 sequences; 12,099,180 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 394 4e-107
>seq12
Length=1077329
Score = 394 bits (436), Expect = 4e-107
Identities = 416/547 (76%), Gaps = 15/547 (3%)
Strand=Plus/Minus
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
|||| ||| |||||| ||| ||||| |||| ||| ||||| | |||||| ||||||||||
Sbjct 463487 TCTANAGCNAAATATNGGCGAGAGANCGATNGCGAACAAGNACAGTGATGGAAAGATGAA 463428
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | |
Sbjct 463427 AAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 463368
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264
||||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 463367 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 463311
Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 463310 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 463252
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | |
Sbjct 463251 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 463194
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||| |||||||| || || |||||||||| ||||||||||||||||||||||
Sbjct 463193 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 463134
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498
||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| ||||
Sbjct 463133 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 463074
Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557
| || || || |||| |||||||||||||||| ||||||||||||||| |||| ||
Sbjct 463073 GCCTCGCAAGAGGNGCACANTCGACCGATCCTGATGNCTTCGGATGGATTTGNGTAANAG 463014
Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
||| |||||||| |||||||| || |||| ||||||||||| || ||| | | || |
Sbjct 463013 CATNNCTGTTGGGNCCCGAAAGNTGNNGAACNATGCCTGAATANGGNGAANCNANAGNNA 462954
Query 618 ACTCTGG 624
| || ||
Sbjct 462953 ANTCNGG 462947
Score = 351 bits (388), Expect = 4e-94
Identities = 391/520 (75%), Gaps = 15/520 (3%)
Strand=Plus/Minus
Query 79 AAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 138
||||| | ||||||||| | |||| | |||| ||||||||| ||||| | |||| | ||
Sbjct 454358 AAATTCCATCTAAAGCTNANTATTNNCGAGAGNCCGATAGCGAACAAGNACAGTGNTGGA 454299
Query 139 AAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198
||||||||||| |||||| |||||||| |||||| |||||||||||||||||||||||
Sbjct 454298 AAGATGAAAAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGG 454239
Query 199 GCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTC 256
|| | | ||||| || ||| | | || ||| | | | | | ||| |
Sbjct 454238 GCATTTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-C 454182
Query 257 TGCGGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCC 313
||| |||||||||||| | || || ||||||| || ||||||| ||
Sbjct 454181 GCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTT 454123
Query 314 CCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC- 372
| |||| || |||||||| | || |||| | ||| || ||||||||| | |||
Sbjct 454122 GCCTCGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGAC 454065
Query 373 -TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGG 431
| | | ||||||||||| |||||||| || || |||||||||| ||||||||||||||
Sbjct 454064 GTAAGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGG 454005
Query 432 AGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG 491
|||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||||
Sbjct 454004 AGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGT 453945
Query 492 AGG-TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTG 549
||| |||| | || || || |||| ||||||||||||||||||| |||||||| ||||
Sbjct 453944 AGGTTGGGGCCTCGCAAGAGGNGCACAATCGACCGATCCTGATGTCNTCGGATGGNTTTG 453885
Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT 589
||| ||| |||||| || | ||| || | || ||||
Sbjct 453884 AGTNAGANCATAGCNGTNGNNNCCCNAANNANGGNNAACT 453845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |