Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671405.1_202016-06- 20] 17 sequences; 12,099,180 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 394 4e-107 >seq12 Length=1077329 Score = 394 bits (436), Expect = 4e-107 Identities = 416/547 (76%), Gaps = 15/547 (3%) Strand=Plus/Minus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 |||| ||| |||||| ||| ||||| |||| ||| ||||| | |||||| |||||||||| Sbjct 463487 TCTANAGCNAAATATNGGCGAGAGANCGATNGCGAACAAGNACAGTGATGGAAAGATGAA 463428 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 463427 AAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 463368 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 463367 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 463311 Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 463310 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 463252 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | Sbjct 463251 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 463194 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 463193 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 463134 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498 ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 463133 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 463074 Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 | || || || |||| |||||||||||||||| ||||||||||||||| |||| || Sbjct 463073 GCCTCGCAAGAGGNGCACANTCGACCGATCCTGATGNCTTCGGATGGATTTGNGTAANAG 463014 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 ||| |||||||| |||||||| || |||| ||||||||||| || ||| | | || | Sbjct 463013 CATNNCTGTTGGGNCCCGAAAGNTGNNGAACNATGCCTGAATANGGNGAANCNANAGNNA 462954 Query 618 ACTCTGG 624 | || || Sbjct 462953 ANTCNGG 462947 Score = 351 bits (388), Expect = 4e-94 Identities = 391/520 (75%), Gaps = 15/520 (3%) Strand=Plus/Minus Query 79 AAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 138 ||||| | ||||||||| | |||| | |||| ||||||||| ||||| | |||| | || Sbjct 454358 AAATTCCATCTAAAGCTNANTATTNNCGAGAGNCCGATAGCGAACAAGNACAGTGNTGGA 454299 Query 139 AAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 ||||||||||| |||||| |||||||| |||||| ||||||||||||||||||||||| Sbjct 454298 AAGATGAAAAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGG 454239 Query 199 GCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTC 256 || | | ||||| || ||| | | || ||| | | | | | ||| | Sbjct 454238 GCATTTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-C 454182 Query 257 TGCGGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCC 313 ||| |||||||||||| | || || ||||||| || ||||||| || Sbjct 454181 GCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTT 454123 Query 314 CCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC- 372 | |||| || |||||||| | || |||| | ||| || ||||||||| | ||| Sbjct 454122 GCCTCGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGAC 454065 Query 373 -TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGG 431 | | | ||||||||||| |||||||| || || |||||||||| |||||||||||||| Sbjct 454064 GTAAGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGG 454005 Query 432 AGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG 491 |||||||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| Sbjct 454004 AGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGT 453945 Query 492 AGG-TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTG 549 ||| |||| | || || || |||| ||||||||||||||||||| |||||||| |||| Sbjct 453944 AGGTTGGGGCCTCGCAAGAGGNGCACAATCGACCGATCCTGATGTCNTCGGATGGNTTTG 453885 Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT 589 ||| ||| |||||| || | ||| || | || |||| Sbjct 453884 AGTNAGANCATAGCNGTNGNNNCCCNAANNANGGNNAACT 453845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350