Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671405.1_202016-06- 20] 17 sequences; 12,099,180 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq12 221 2e-55 >seq12 Length=1077329 Score = 221 bits (244), Expect = 2e-55 Identities = 230/293 (78%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| | Sbjct 460779 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 460722 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 460721 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 460662 Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169 ||||| ||||| |||| | || |||| ||| |||||||||| |||| | Sbjct 460661 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 460602 Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 || | | ||||| |||||||| ||||||| || |||||| || ||| ||| Sbjct 460601 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT- 460543 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| |||||||| ||| |||| |||||||||| |||| | ||||| Sbjct 460542 TGCTGGCGAATTGCAATGTCATTTTGCGNGGGGATAAATCATTTGTATACGAC 460490 Score = 214 bits (236), Expect = 3e-53 Identities = 228/293 (78%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| | Sbjct 451642 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 451585 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 451584 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 451525 Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169 ||||| ||||| |||| | || |||| ||| |||||||||| |||| | Sbjct 451524 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 451465 Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 || | | ||||| |||||||| ||||||| || |||||| || ||| ||| Sbjct 451464 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT- 451406 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| |||||||| ||| |||| |||||||||| || | ||||| Sbjct 451405 TGCTGGCGAATTGCAATGTCATTTTGCGTGGGGATAAATCATTNNTANACGAC 451353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199865088