Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671435.1_202016-06- 20] 17 sequences; 12,132,872 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 360 8e-97 >seq12 Length=1077593 Score = 360 bits (398), Expect = 8e-97 Identities = 398/530 (75%), Gaps = 15/530 (3%) Strand=Plus/Minus Query 89 TAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148 ||||| || |||||||| |||||||| |||| ||||||| |||||| |||||||||||| Sbjct 463742 TAAAGNTANATATTGGCGNGAGACCGANAGCGAACAAGTACAGTGATGGAAAGATGAAAA 463683 Query 149 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208 | |||||| |||||||| |||||| ||||||||||||||||||||||| || | | | Sbjct 463682 GAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATC 463623 Query 209 AGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA-- 264 |||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 463622 AGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACT 463566 Query 265 -GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 463565 GGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAA 463507 Query 324 GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAG 381 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | || Sbjct 463506 GTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAG 463449 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 ||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| | Sbjct 463448 GATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGT 463389 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAA 500 |||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 463388 CTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGC 463329 Query 501 CCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 | || || || |||| ||||| |||||||||||||||||| ||| ||||| ||||| | Sbjct 463328 CTCGCAAGAGGNGCACAATCGANCGATCCTGATGTCTTCGGNTGGNTTTGANNAAGAGNA 463269 Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 ||||| ||| ||||| | | || || | || ||| |||| || || Sbjct 463268 NAGCTGNTGGNACCCGNANNANGGNGANNNNTNCCNGAANAGGGNGANGC 463219 Score = 351 bits (388), Expect = 4e-94 Identities = 411/561 (73%), Gaps = 15/561 (3%) Strand=Plus/Minus Query 52 TTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGA 111 ||||||| || || |||| ||| | || | || || | | ||||| | ||| Sbjct 454642 TTGGGAANGCNGCNCTAANNGGGNNNNANNTTCCNNCTNNAGNNNANTNTTGGCGANAGA 454583 Query 112 CCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAA 171 ||||||||| ||||||| || ||| ||||||||||||| |||||| ||||||||| |||| Sbjct 454582 CCGATAGCGAACAAGTACAGNGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAA 454523 Query 172 AGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAAC 231 || ||||||||||||||||||||||| || | | ||||| || ||| | Sbjct 454522 AGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT-- 454465 Query 232 CGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCGGT 286 | || ||| | | | | | ||| | ||| |||||||||||| | || || Sbjct 454464 CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTGGC 454406 Query 287 CGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATG 346 ||||||| || ||||||| || | |||| || |||||||| | || |||| Sbjct 454405 AGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAATA 454349 Query 347 CGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAG 404 | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| || | Sbjct 454348 CTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATATG 454289 Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 | |||||||||| |||||||||||||||||||||| |||||||||||||||||| || || Sbjct 454288 CCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGNGTAAA 454229 Query 465 ACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCGAC 522 |||| | ||||||||||||||||||| ||| |||| | || || || |||| |||||| Sbjct 454228 ACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAATCGAC 454169 Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 ||||||||||||||| |||||| || |||||||||| | | ||||| | | | ||| Sbjct 454168 CGATCCTGATGTCTTNGGATGGNNNTGNGTAAGAGCATNGNTNTTGGGNCNNGNNANATG 454109 Query 583 GTGAACTATGCCTGAATAGGG 603 | ||||||| | |||| Sbjct 454108 NNNNANNATGCCTGNANAGGG 454088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350