Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671565.1_202016-06-
20] 17 sequences; 12,117,350 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq5 136 3e-27
seq10 120 2e-22
seq9 116 3e-21
>seq5
Length=574664
Score = 136 bits (150), Expect = 3e-27
Identities = 393/605 (65%), Gaps = 0/605 (0%)
Strand=Plus/Minus
Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379
|||| | ||| ||||| ||| || |||||||| ||||| || || ||| | |||
Sbjct 298122 CCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCT 298063
Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439
| ||| || ||||| | ||||| || || | | || | || ||||| || ||
Sbjct 298062 CTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCA 298003
Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499
|||||||||||||||||||| | ||| |||| || | ||| ||||| |||||
Sbjct 298002 GCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCA 297943
Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559
|| || || || || ||||| ||||| | ||| || | | |||||||| | ||
Sbjct 297942 ACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCG 297883
Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619
|| || || | ||| || || || || || | || | || ||||||||||||
Sbjct 297882 TTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCA 297823
Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679
|| || || || || || |||||| || || || | | || || || || |||
Sbjct 297822 CCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAG 297763
Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739
|| |||| |||| | | | | || || | ||| ||||| || || |||| |
Sbjct 297762 TCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTG 297703
Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799
|| | || || | ||||| ||||| || | ||||||| | || ||||| || |
Sbjct 297702 AACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAA 297643
Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGC 66859
|||| || || | | || || || || ||||| || ||| | | | ||| ||
Sbjct 297642 GCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGA 297583
Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919
|||||| ||| || | ||||| | ||| || || ||||||| || || | ||||
Sbjct 297582 CGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCA 297523
Query 66920 AAGTA 66924
|| ||
Sbjct 297522 AAATA 297518
>seq10
Length=744894
Score = 120 bits (132), Expect = 2e-22
Identities = 371/569 (65%), Gaps = 15/569 (3%)
Strand=Plus/Plus
Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125
||||| ||| |||| | || || |||| ||||| || |||||||| ||||||
Sbjct 391927 TTCCCTATCAAGTACCATGAAATCTGGCAAGCCTACAAGCGTGCCGAAGCTTCTTTCTGG 391986
Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT 61185
|| | || || | |||||||| || || || |||||||| | | || ||
Sbjct 391987 ACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAACGA- 392045
Query 61186 GAACAACA----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGT 61241
|||| | | ||||||| || | || || || |||||||| |||||||| ||
Sbjct 392046 GAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCCGCTTCTGACGGTATTGT 392105
Query 61242 CAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTT 61301
||||| || || | ||| ||| | || || ||| | | ||||| ||||
Sbjct 392106 TAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAAGAGTTT 392165
Query 61302 CTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGA 61361
|||||| ||||| || || || ||| | ||||| || | ||| | | |||||
Sbjct 392166 CTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTTGATCGA 392225
Query 61362 TACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACC 61421
||| ||||||| ||| | ||| ||||| |||||||||||||| | || || ||
Sbjct 392226 TACTTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACACCATCCC 392285
Query 61422 GG----CGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA-TCACCAGTACAACGGCT 61476
| |||||| ||| || || ||||| || | |||| ||| | ||| ||
Sbjct 392286 AGAAATCGGTGA----GAAGGCCGAATGGGCTTTAAGATGGATTCAAGACGCTGACGCCT 392341
Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536
||||||||| || | | || ||||| | || ||||| |||||| || ||
Sbjct 392342 -TGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCC 392400
Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596
|||||| | || || |||||||| || | || | ||||||||| | ||||| |||
Sbjct 392401 TTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAAC 392460
Query 61597 GAGTTGATATCACGCGACGAGGGCATGCA 61625
|| ||||| | | ||||| || ||||
Sbjct 392461 GAATTGATCTGTAGAGACGAAGGTTTGCA 392489
>seq9
Length=438457
Score = 116 bits (128), Expect = 3e-21
Identities = 415/644 (64%), Gaps = 10/644 (2%)
Strand=Plus/Plus
Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379
||||||| || ||||| ||| || |||||||| ||||| || || ||| | |||
Sbjct 238895 CCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCT 238954
Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439
| ||| || || || | || || |||| | | |||| || || ||||| ||
Sbjct 238955 CTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCT 239014
Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499
||||||||||| |||| | | | |||||| | || | ||| ||||| |||||
Sbjct 239015 GCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCC 239074
Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559
|| || || || ||| ||||| ||||| | ||| || | | |||||| || | ||
Sbjct 239075 ACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCG 239134
Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619
||||| || |||| || ||| | || || | || | || ||||||| ||||
Sbjct 239135 TTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCA 239194
Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679
|| || || || || || |||||| || || || | || || || || |||
Sbjct 239195 CCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAG 239254
Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739
||| |||| |||| | | | | |||||| | ||| || | || || | || |
Sbjct 239255 TCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTG 239314
Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799
|| | || || | |||||| || ||||| ||||| |||| || |||| |
Sbjct 239315 AATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGC 239374
Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGG 66858
|||| || || | ||||| || || || | |||| ||||| | | | |||||
Sbjct 239375 ACAGATTCGATATCGCTACCATGGATACCTAGCGCCACA-CGCATTACCAAATGCTGAGG 239433
Query 66859 CCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914
||||| ||| ||| || | || || ||||| || || ||||| |||||||
Sbjct 239434 ACGTTCTGCCACTTCACCGTTCAGTCTTA-GC---AAGTACGAACGCTCCAGTGTCTTGA 239489
Query 66915 TACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958
|| || |||| || | |||||| || | | ||||||||||
Sbjct 239490 ATCCGAAATACGTATACTGGAAATCCCTATCGTACACGATGGCC 239533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567917628880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |