Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671655.1_202016-06- 20] 17 sequences; 12,117,134 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 473 5e-131 >seq12 Length=1077957 Score = 473 bits (524), Expect = 5e-131 Identities = 468/605 (77%), Gaps = 15/605 (2%) Strand=Plus/Minus Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91 ||||||| | | ||||||||||||| |||||||||||| ||| || | ||| | ||| Sbjct 454904 CCTTCGAAGNGNCGAGTTGTTTGGGNATGCAGCTCTAAGNGGGNGGNANATTCCATCTNN 454845 Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151 |||||||||||||| |||||||||||||| ||||||| | ||| ||||||||||||| | Sbjct 454844 AGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACANNGATGGAAAGATGAAAAGAA 454785 Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGA 211 ||||| ||||||||| |||||| ||||||||||||||||||||||| || | | |||| Sbjct 454784 CTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGA 454725 Query 212 CTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GG 266 | || ||| | | || ||| | | | | | ||| | ||| || Sbjct 454724 CATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGG 454668 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 |||||||||| | || || ||||||| || ||||||| || | |||| || Sbjct 454667 CCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTA 454609 Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGAT 384 |||||||| | || |||| | ||| || ||||||||| | ||| | | | ||||| Sbjct 454608 TTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGAT 454551 Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444 |||||| |||||||| || || |||||||||| |||||||||||||||||||||| |||| Sbjct 454550 GCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTA 454491 Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCC 503 ||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | | Sbjct 454490 TGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTC 454431 Query 504 GTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 | || || |||| ||||||||||||||| |||||||||||| | ||| | ||||| | Sbjct 454430 GCAAGAGGNGCACAATCGACCGATCCTGANGTCTTCGGATGGNTNNGAGNANNAGCATNG 454371 Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 |||| |||||||||||||||| | |||||||||||| ||| ||||||||| || |||| Sbjct 454370 CTGTNGGGACCCGAAAGATGGNNANCTATGCCTGAATNGGGNNAAGCCAGAGNAANCTCT 454311 Query 623 GGTGG 627 || || Sbjct 454310 GGNGG 454306 Score = 450 bits (498), Expect = 6e-124 Identities = 457/595 (77%), Gaps = 15/595 (3%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||| || ||||||||||||||||||||| || |||| | | ||||||| Sbjct 464050 TGTAAAGTGCCTTNGANGAGTCGAGTTGTTTGGGAATGNAGNNCTAAGNGNGNGGTAAAT 463991 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||| ||||||||||| |||| ||||||||| ||||||| |||||| |||||| Sbjct 463990 TCCATCTAAAGNTAAATATTGGCGAGAGNCCGATAGCGAACAAGTACAGTGATGGAAAGA 463931 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | Sbjct 463930 TGAAAAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 463871 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCG 260 | ||||| || ||| | | || ||| | | | | | ||| | Sbjct 463870 TTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCAT 463814 Query 261 GTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 ||| |||||||||||| | || || ||||||| || ||||||| || | | Sbjct 463813 TTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCT 463755 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCC 375 ||| || |||||||| | || |||| | ||| || ||||||||| | ||| | Sbjct 463754 CGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAA 463697 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | | ||||||||||| |||||||| || || |||||||||| |||||||||||||||||| Sbjct 463696 GTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTC 463637 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG- 494 |||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| Sbjct 463636 TAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGT 463577 Query 495 TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 |||| | || || || |||| ||||||||||||||| ||||||||||||| |||| | Sbjct 463576 TGGGGCCTCGCAAGAGGNGCACAATCGACCGATCCTGANGTCTTCGGATGGANNTGAGNA 463517 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 |||| |||||||| |||||||||||||||| || |||| | ||| |||| Sbjct 463516 AGAGNATAGCTGTNGGGACCCGAAAGATGGNNNNCTNNNCCTGNNTNGGGNGAAG 463462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350