Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671685.1_202016-06-
20] 17 sequences; 12,118,824 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 396 1e-107
>seq12
Length=1076869
Score = 396 bits (438), Expect = 1e-107
Identities = 414/542 (76%), Gaps = 15/542 (3%)
Strand=Plus/Minus
Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146
||||| ||||||||||||| ||||| |||||||| ||||| | |||||| ||||||||||
Sbjct 463076 TCTAANGCTAAATATTGGCGAGAGANCGATAGCGAACAAGNACAGTGATGGAAAGATGAA 463017
Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206
||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | |
Sbjct 463016 AAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 462957
Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264
||||| || ||| | | || ||| | | | | | ||| | |||
Sbjct 462956 TCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 462900
Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||| | || || ||||||| || ||||||| || | ||||
Sbjct 462899 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 462841
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379
|| |||||||| | || |||| | ||| || ||||||||| | ||| | | |
Sbjct 462840 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 462783
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||| |||||||| || || |||||||||| ||||||||||||||||||||||
Sbjct 462782 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 462723
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498
|||||||||||||||||| || |||||| | ||||||||||||||||||| ||| ||||
Sbjct 462722 GTCTATGCGAGTGTTTGGGNGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 462663
Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557
| || || || |||| |||||||| ||||| || |||| ||||| ||||||||
Sbjct 462662 GCCTCGCAAGAGGNGCACAATCGACCGNNCCTGANGTNTTCGNNTGGATNTGAGTAAGNN 462603
Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
||| ||||||||||||||||| |||| ||||| ||||||||| ||| ||||| ||| |
Sbjct 462602 CATNGCTGTTGGGACCCGAAANATGGNGAACTNTGCCTGAATNGGGNNAAGCCNGAGNNA 462543
Query 618 AC 619
||
Sbjct 462542 AC 462541
Score = 324 bits (358), Expect = 6e-86
Identities = 386/526 (73%), Gaps = 15/526 (3%)
Strand=Plus/Minus
Query 82 TTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 141
|| | | || |||| ||| | | | | |||||||| ||| ||||| | |||||| |||||
Sbjct 453944 TTCCNTNTANAGCTNAATNTNGNCGANAGACCGATNGCGNACAAGNACAGTGATGGAAAG 453885
Query 142 ATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCT 201
|||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| ||
Sbjct 453884 ATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCA 453825
Query 202 TGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGC 259
| | ||||| || ||| | | || ||| | | | | | ||| |
Sbjct 453824 TTTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCA 453768
Query 260 GGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCT 316
||| |||||||||||| | || || ||||||| || ||||||| || |
Sbjct 453767 TTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCC 453709
Query 317 TCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TC 374
|||| || |||||||| | || |||| | ||| || ||||||||| | ||| |
Sbjct 453708 TCGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTA 453651
Query 375 CGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGT 434
| | ||||||||||| |||||||| || || |||||||||| |||||||||||||||||
Sbjct 453650 AGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGT 453591
Query 435 CTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG 494
||||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| |||
Sbjct 453590 CTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGG 453531
Query 495 -TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 552
|||| | || || |||| || |||||||||||||| | || | || | ||||
Sbjct 453530 TTGGGGCNTNGCAAGAGGNGCACAATNGACCGATCCTGATGNNNTNGGNTNGANTNGAGT 453471
Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAA 598
||| ||||| | || |||| ||| | ||| ||||| ||| ||
Sbjct 453470 AAGNGCATANCNGTNNGGACNNGAANGNTGGNNNACTATNCCTNAA 453425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |