Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671715.1_202016-06- 20] 17 sequences; 12,121,325 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 322 2e-85 >seq12 Length=1077778 Score = 322 bits (356), Expect = 2e-85 Identities = 391/538 (73%), Gaps = 15/538 (3%) Strand=Plus/Minus Query 90 AAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149 ||| | || || || | ||||| |||| ||||| | || ||| |||||||||||| Sbjct 463961 AAANCNAANNNTTNGCNNGNNACCGANAGCGAACAAGNACAGNGATGNAAAGATGAAAAG 463902 Query 150 CACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCA 209 |||||| |||||||| |||||| ||||||||||||||||||||||| || | | || Sbjct 463901 AACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCA 463842 Query 210 GACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA--- 264 ||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 463841 GACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTG 463785 Query 265 GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324 |||||||||||| | || || ||||||| || ||||||| || | |||| | Sbjct 463784 GGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAG 463726 Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGG 382 | |||||||| | || |||| | ||| || ||||||||| | ||| | | | ||| Sbjct 463725 TATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGG 463668 Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442 |||||||| |||||||| || || |||||||||| |||||||||||||||||||||| || Sbjct 463667 ATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTC 463608 Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAAC 501 |||||||||||||||| || |||||| | ||||||||||||||||||| ||| |||| | Sbjct 463607 TATGCGAGTGTTTGGGNGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCC 463548 Query 502 CCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560 || || || |||| || |||||||||||||| || | |||||||||||||| | || Sbjct 463547 TCGCAAGAGGNGCACAATNGACCGATCCTGATGNCTNCNGATGGATTTGAGTANNNGNAT 463488 Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 | || || || ||||||||| | ||| | ||| |||| || || | ||||| Sbjct 463487 NNCNGTNNGGNCCNGAAAGATGGNNANCTANNCNTGANNAGGGNGANGCNNGNGGAAA 463430 Score = 275 bits (304), Expect = 3e-71 Identities = 364/510 (71%), Gaps = 15/510 (3%) Strand=Plus/Minus Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGT 166 |||| ||| | || ||| || |||||| |||||||||||| |||||| |||||||| Sbjct 454807 AGAGNCCGNTNGCNNNCAANTACAGTGATGGAAAGATGAAAANAACTTTGAAAAGAGAGN 454748 Query 167 TAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGC 226 |||||| ||||||||||||||||||||||| || | | ||||| || ||| Sbjct 454747 GAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGC 454688 Query 227 TCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGG 281 | | || ||| | | | | | ||| | ||| |||||||||||| | | Sbjct 454687 CCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTG 454631 Query 282 GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTG 341 | || ||||||| || ||||||| || | |||| || |||||||| | || Sbjct 454630 GTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG-- 454574 Query 342 GAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTT 399 |||| | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| Sbjct 454573 GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTT 454514 Query 400 GTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT 459 || || |||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct 454513 ATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGT 454454 Query 460 GTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCA 517 || |||||| | ||||||||||||||||||| ||| |||| | || || || |||| | Sbjct 454453 GTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAA 454394 Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 || |||||||||| |||| ||| |||| | || | | || | | || | | Sbjct 454393 TCNNNCGATCCTGATNTCTTNNGATNNATTTNNGNAANNGNANAGNNGNTNNGANNNGNA 454334 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAA 607 | | | || || |||| || ||| ||| Sbjct 454333 ANNTNGNGANCTNTGCCNGANNAGGNNGAA 454304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350