Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671745.1_202016-06-
20] 17 sequences; 12,112,976 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 352 1e-94
>seq12
Length=1077135
Score = 352 bits (390), Expect = 1e-94
Identities = 393/525 (75%), Gaps = 15/525 (3%)
Strand=Plus/Minus
Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGT 166
|| ||||||||||| ||| | | |||||| |||||| |||||| |||||| ||||||||
Sbjct 463737 AGNGACCGATAGCGAACANGNACAGTGATGGAAAGANGAAAAGAACTTTGAAAAGAGAGN 463678
Query 167 TAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGC 226
|||||| ||||||||||||||||||||||| || | | ||||| || |||
Sbjct 463677 GAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGC 463618
Query 227 TCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGG 281
| | || ||| | | | | | ||| | ||| |||||||||||| | |
Sbjct 463617 CCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTG 463561
Query 282 GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTG 341
| || ||||||| || ||||||| || | |||| || |||||||| | ||
Sbjct 463560 GTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG-- 463504
Query 342 GAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTT 399
|||| | ||| || ||||||||| | ||| | | | ||||||||||| ||||||||
Sbjct 463503 GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTT 463444
Query 400 GTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT 459
|| || |||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 463443 ATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGN 463384
Query 460 GTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCA 517
|| |||||| | ||||||||||||| ||||| ||| |||| | || || || |||| |
Sbjct 463383 GTAAAACCCATACGCGTAATGAAAGNGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAA 463324
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
||||||||||||||||||| | |||||||||||| ||||||||||| |||||| | ||||
Sbjct 463323 TCGACCGATCCTGATGTCTNCNGATGGATTTGAGNAAGAGCATAGCNGTTGGGNCNCGAA 463264
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622
||| || | || |||| || || | |||| ||||| |||
Sbjct 463263 AGANGGNNNNCNATNNCTGANTANGGNGNNGCCANNGGAAANTCT 463219
Score = 333 bits (368), Expect = 1e-88
Identities = 377/504 (75%), Gaps = 15/504 (3%)
Strand=Plus/Minus
Query 108 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTT 167
|||| ||| | | ||||| || ||| ||||||||||||| |||||| ||||||||
Sbjct 454599 GAGANNNATANNGAANAAGTACAGNGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNG 454540
Query 168 AAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCT 227
|||||| ||||||||||||||||||||||| || | | ||||| || |||
Sbjct 454539 AAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCC 454480
Query 228 CAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGG 282
| | || ||| | | | | | ||| | ||| |||||||||||| | ||
Sbjct 454479 CT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGG 454423
Query 283 CGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGG 342
|| ||||||| || ||||||| || | |||| || |||||||| | || |
Sbjct 454422 TGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--G 454366
Query 343 AATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTG 400
||| | ||| || ||||||||| | ||| | | | ||||||||||| ||||||||
Sbjct 454365 AATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTA 454306
Query 401 TAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG 460
|| || |||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 454305 TATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTG 454246
Query 461 TCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCAT 518
| |||||| | ||||||||||||||||||| ||| |||| | || || || |||| ||
Sbjct 454245 TAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAAT 454186
Query 519 CGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAA 578
||||||||||||||||||||||||||||||| | | |||||| ||| ||||| || ||
Sbjct 454185 CGACCGATCCTGATGTCTTCGGATGGATTTGNGNANGAGCATNGCTNTTGGGNCCNNNAA 454126
Query 579 GATGGTGAACTATGCCTGAATAGG 602
||||| || || | | ||| |||
Sbjct 454125 GATGGNGANCTNTNCNNGAANAGG 454102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |