Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671745.1_202016-06- 20] 17 sequences; 12,112,976 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 352 1e-94 >seq12 Length=1077135 Score = 352 bits (390), Expect = 1e-94 Identities = 393/525 (75%), Gaps = 15/525 (3%) Strand=Plus/Minus Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGT 166 || ||||||||||| ||| | | |||||| |||||| |||||| |||||| |||||||| Sbjct 463737 AGNGACCGATAGCGAACANGNACAGTGATGGAAAGANGAAAAGAACTTTGAAAAGAGAGN 463678 Query 167 TAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGC 226 |||||| ||||||||||||||||||||||| || | | ||||| || ||| Sbjct 463677 GAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGC 463618 Query 227 TCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGG 281 | | || ||| | | | | | ||| | ||| |||||||||||| | | Sbjct 463617 CCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTG 463561 Query 282 GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTG 341 | || ||||||| || ||||||| || | |||| || |||||||| | || Sbjct 463560 GTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG-- 463504 Query 342 GAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTT 399 |||| | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| Sbjct 463503 GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTT 463444 Query 400 GTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT 459 || || |||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct 463443 ATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGN 463384 Query 460 GTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCA 517 || |||||| | ||||||||||||| ||||| ||| |||| | || || || |||| | Sbjct 463383 GTAAAACCCATACGCGTAATGAAAGNGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAA 463324 Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 ||||||||||||||||||| | |||||||||||| ||||||||||| |||||| | |||| Sbjct 463323 TCGACCGATCCTGATGTCTNCNGATGGATTTGAGNAAGAGCATAGCNGTTGGGNCNCGAA 463264 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||| || | || |||| || || | |||| ||||| ||| Sbjct 463263 AGANGGNNNNCNATNNCTGANTANGGNGNNGCCANNGGAAANTCT 463219 Score = 333 bits (368), Expect = 1e-88 Identities = 377/504 (75%), Gaps = 15/504 (3%) Strand=Plus/Minus Query 108 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTT 167 |||| ||| | | ||||| || ||| ||||||||||||| |||||| |||||||| Sbjct 454599 GAGANNNATANNGAANAAGTACAGNGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNG 454540 Query 168 AAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCT 227 |||||| ||||||||||||||||||||||| || | | ||||| || ||| Sbjct 454539 AAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCC 454480 Query 228 CAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGG 282 | | || ||| | | | | | ||| | ||| |||||||||||| | || Sbjct 454479 CT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGG 454423 Query 283 CGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGG 342 || ||||||| || ||||||| || | |||| || |||||||| | || | Sbjct 454422 TGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--G 454366 Query 343 AATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTG 400 ||| | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| Sbjct 454365 AATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTA 454306 Query 401 TAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG 460 || || |||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct 454305 TATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTG 454246 Query 461 TCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCAT 518 | |||||| | ||||||||||||||||||| ||| |||| | || || || |||| || Sbjct 454245 TAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAAT 454186 Query 519 CGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAA 578 ||||||||||||||||||||||||||||||| | | |||||| ||| ||||| || || Sbjct 454185 CGACCGATCCTGATGTCTTCGGATGGATTTGNGNANGAGCATNGCTNTTGGGNCCNNNAA 454126 Query 579 GATGGTGAACTATGCCTGAATAGG 602 ||||| || || | | ||| ||| Sbjct 454125 GATGGNGANCTNTNCNNGAANAGG 454102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350