Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671775.1_202016-06- 20] 17 sequences; 12,124,762 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 426 7e-117 >seq12 Length=1077857 Score = 426 bits (472), Expect = 7e-117 Identities = 420/537 (78%), Gaps = 15/537 (3%) Strand=Plus/Minus Query 89 TAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148 ||| |||||||| |||| |||||||||||||| ||||||| |||||| |||||||||||| Sbjct 454853 TAANGCTAAATANTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAA 454794 Query 149 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208 | |||||| |||||||| |||||| ||||||||||||||||||||||| || | | | Sbjct 454793 GAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATC 454734 Query 209 AGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA-- 264 |||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 454733 AGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACT 454677 Query 265 -GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 454676 GGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAA 454618 Query 324 GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAG 381 | |||||||| | || |||| | ||| || ||||||||| | ||| | | | || Sbjct 454617 GNATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAG 454560 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 ||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| | Sbjct 454559 GATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGT 454500 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAA 500 |||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 454499 CTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGC 454440 Query 501 CCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 | || || || || | |||| ||||||||||||||| |||||||||||| ||||||||| Sbjct 454439 CTCGCAAGAGGNGCNCAATCGNCCGATCCTGATGTCTNCGGATGGATTTGNGTAAGAGCA 454380 Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616 |||||||||||||||||||| ||| |||||||||||| |||||| ||||||| |||| Sbjct 454379 TAGCTGTTGGGACCCGAAAGNTGGNGAACTATGCCTGNATAGGGNGAAGCCANAGGA 454323 Score = 408 bits (452), Expect = 2e-111 Identities = 431/569 (76%), Gaps = 15/569 (3%) Strand=Plus/Minus Query 62 AGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGC 121 ||| ||| || ||| || | | | |||||||||| || | || |||||||||| Sbjct 464017 AGCNCTANNTGNNNGGTNAANTCCANCNNAAGCTAAATANTGNCGNGANACCGATAGCGA 463958 Query 122 ACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAA 181 ||||| | |||||| ||||||||||||| |||||| ||||||||| |||||| ||||||| Sbjct 463957 ACAAGNACAGTGATNGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAA 463898 Query 182 ATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG 241 |||||||||||||||| || | | ||||| || ||| | | || ||| | Sbjct 463897 ATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTG 463840 Query 242 GCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGG 296 | | | | ||| | ||| |||||||||||| | || || ||||||| Sbjct 463839 TGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT- 463782 Query 297 CCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCT 356 || ||||||| || | |||| || |||||||| | || |||| | ||| || Sbjct 463781 CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTG 463724 Query 357 GGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCT 414 ||||||||| | ||| | | | ||||||||||| |||||||| || || |||||||| Sbjct 463723 GGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCT 463664 Query 415 TGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGC 474 || |||||||||||||||||||||| |||||||||| |||||||||| |||||| | ||| Sbjct 463663 TGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGNGTTTGGGTGTAAAACCCATACGC 463604 Query 475 GTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGAT 532 |||||||||||||||| ||| |||| | || || || |||| |||||||||||||||| Sbjct 463603 GTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAATCGACCGATCCTGAT 463544 Query 533 GTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATG 592 |||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||| Sbjct 463543 GTCTTCGGNTGGATTTGAGNAAGAGCATAGCTGTTGGGACCCGNAAGATGGNNAACTATG 463484 Query 593 CCTGAATAGGGTGAAGCCAGAGGAAACTC 621 |||||||| ||| | | ||| ||| Sbjct 463483 NCTGAATAGNNNGAANNCNGNGGANNCTC 463455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350