Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671805.1_202016-06- 20] 17 sequences; 12,111,380 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 471 2e-130 >seq12 Length=1077771 Score = 471 bits (522), Expect = 2e-130 Identities = 482/635 (76%), Gaps = 15/635 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||| | ||| | | | | || | ||| ||| || || | |||| Sbjct 454897 TGTNAAGNNNCTTNGNAGAGNCNNGNTNTNNNGGNANGCANCTCNAAGNNGGNGNNAAAT 454838 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | |||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 454837 TCCANCTAAAGCTAAATATTGGCGAGAGACCGATAGCGNACAAGTACAGTGATGGAAAGA 454778 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | Sbjct 454777 TGAAAAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 454718 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCG 260 | ||||| || ||| | | || ||| | | | | | ||| | Sbjct 454717 TTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCAT 454661 Query 261 GTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 ||| |||||||||||| | || || ||||||| || ||||||| || | | Sbjct 454660 TTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCT 454602 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCC 375 ||| || |||||||| | || |||| | ||| || ||||||||| | ||| | Sbjct 454601 CGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAA 454544 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | | ||||||||||| |||||||| || || |||||||||| |||||||||||||||||| Sbjct 454543 GTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTC 454484 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 |||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| Sbjct 454483 TAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGT 454424 Query 496 GGGAACC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 || || || || || |||| ||||||||||||||||| |||||||||||| || ||| Sbjct 454423 TGGGGCCTCGCAAGAGGNGCACAATCGACCGATCCTGATGNCTTCGGATGGATNTGNGTA 454364 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||||| ||| |||| |||||| || || | |||||| |||||||||| ||||||||| Sbjct 454363 AGAGCATANCTGNTGGGNCCCGAANGANGGNGNACTATGNCTGAATAGGGNGAAGCCAGA 454304 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCG 648 ||||||||||| | |||| | || || |||| || Sbjct 454303 GGAAACTCTGGNNGNGGCTNGNAGNGGNTCTGNCG 454269 Score = 426 bits (472), Expect = 7e-117 Identities = 458/612 (75%), Gaps = 15/612 (2%) Strand=Plus/Minus Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91 ||||||| | | || || | ||||| | ||| | | || ||||| | | | Sbjct 464025 CCTTCGAAGNGNNGANTTNTNTGGGANNGNAGCNNNANGTNGGNNNNAAATTNCATNTNN 463966 Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151 ||||| |||||||| |||| ||| ||||| ||||| | |||||| ||||||||||||| | Sbjct 463965 AGCTANATATTGGCGAGAGNCCGNTAGCGAACAAGNACAGTGATGGAAAGATGAAAAGAA 463906 Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGA 211 ||||| |||||||| |||||| ||||||||||||||||||||||| || | | |||| Sbjct 463905 CTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGA 463846 Query 212 CTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GG 266 | || ||| | | || ||| | | | | | ||| | ||| || Sbjct 463845 CATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGG 463789 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 |||||||||| | || || ||||||| || ||||||| || | |||| || Sbjct 463788 CCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTA 463730 Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGAT 384 |||||||| | || |||| | ||| || ||||||||| | ||| | | | ||||| Sbjct 463729 TTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGAT 463672 Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444 |||||| |||||||| || || |||||||||| |||||||||||||||||||||| |||| Sbjct 463671 GCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTA 463612 Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCC 503 ||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | | Sbjct 463611 TGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTC 463552 Query 504 GTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 | || || |||| ||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct 463551 GCAAGAGGNGCACAATCGACCGATCCTGATGNCTTCGGATGGATTTGAGTAAGAGNATAG 463492 Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 |||||||| |||||||| || |||||||||||||| |||| | ||| ||||| || Sbjct 463491 CTGTTGGGNCCCGAAAGNNGGNGAACTATGCCTGAANAGGGNNANNNCAGNNGAAACNCT 463432 Query 623 GGTGGAGGCTCG 634 | || || || Sbjct 463431 GNNGGNNGCNCG 463420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350