Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671835.1_202016-06- 20] 17 sequences; 12,111,137 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 403 7e-110 >seq12 Length=1077616 Score = 403 bits (446), Expect = 7e-110 Identities = 445/600 (74%), Gaps = 15/600 (3%) Strand=Plus/Minus Query 27 AAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCT 86 ||| |||| || | | ||| | | |||||| || | | | || | ||||| Sbjct 454725 AAGNGCCTTNGAAGNGNCGANNNGNNTNGGAATGNNGCNNTNAGTNGGNGNNAAATTCNA 454666 Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 | |||| |||||||||||| ||||| ||| | | ||||||| || ||| |||||||||| Sbjct 454665 TNTAAANCTAAATATTGGCNAGAGANCGANNGNGAACAAGTANAGNGATGGAAAGATGAA 454606 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA 206 ||| |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 454605 AAGAACTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGA 454546 Query 207 CCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 454545 TCAGACATGGNGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCA 454489 Query 265 ---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 454488 CTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGT 454430 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCT 379 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | Sbjct 454429 AAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCA 454372 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 454371 AGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 454312 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGG 498 ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 454311 GTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGG 454252 Query 499 AACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 | || || || |||| ||||||||||||||||||| ||||||||||||||||| ||| Sbjct 454251 GCCTCGCAAGAGGNGCACAATCGACCGATCCTGATGTCNTCGGATGGATTTGAGTANGAG 454192 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 ||||||||||||||||| || ||||| | ||||| | ||||| | || || | || Sbjct 454191 CATAGCTGTTGGGACCCNAANGATGGNGNNCTATGNCNNNNTAGGGNNANGCNAGNGNAA 454132 Score = 307 bits (340), Expect = 4e-81 Identities = 378/520 (73%), Gaps = 15/520 (3%) Strand=Plus/Minus Query 91 AAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGC 150 ||||| || |||| |||| |||| ||| ||||| | ||||| |||||||||| | Sbjct 463798 AAGCTNNNTANTGGCNAGAGNCCGANNGCGAACAAGNACAGTGANGNAAAGATGAAANGA 463739 Query 151 ACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAG 210 |||||| |||||||| |||||| ||||||||||||||||||||||| || | | ||| Sbjct 463738 ACTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAG 463679 Query 211 ACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---G 265 || || ||| | | || ||| | | | | | ||| | ||| | Sbjct 463678 ACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGG 463622 Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325 |||||||||| | || || ||||||| || ||||||| || | |||| || Sbjct 463621 NCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGT 463563 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGA 383 |||||||| | || |||| | ||| || ||||||||| | ||| | | | |||| Sbjct 463562 ATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGA 463505 Query 384 TGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCT 443 ||||||| |||||||| || || |||||||||| |||||||||||||||||||||| ||| Sbjct 463504 TGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCT 463445 Query 444 ATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACC 502 |||||||||||||||||| |||||| | ||||||||||||| ||||| ||| |||| | Sbjct 463444 ATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGNGAACGTAGGTTGGGGCCT 463385 Query 503 CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561 || || || |||| ||||||||||||||| | ||||| |||| | |||| ||||||| Sbjct 463384 CGCAAGAGGNGCACAATCGACCGATCCTGANGNCTTCGNATGGNTNTGAGNNAGAGCATN 463325 Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAG 601 ||||| ||| | || | || |||||| |||| Sbjct 463324 GCTGTNGGGNCNNGANNGNNGGNNNNNNATGCCTNNATAG 463285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350