Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671865.1_202016-06- 20] 17 sequences; 12,098,296 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 398 3e-108 >seq12 Length=1077494 Score = 398 bits (440), Expect = 3e-108 Identities = 417/547 (76%), Gaps = 15/547 (3%) Strand=Plus/Minus Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||| | |||||| ||||||| ||||| | |||||| ||||||||||||| ||| Sbjct 463720 CTAAATATNNNCGAGAGACNGATAGCGAACAAGNACAGTGATGGAAAGATGAAAAGAACT 463661 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| |||||||| |||||| ||||||||||||||||||||||| || | | ||||| Sbjct 463660 TTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACA 463601 Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCC 268 || ||| | | || ||| | | | | | ||| | ||| |||| Sbjct 463600 TGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCC 463544 Query 269 AGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTT 328 |||||||| | || || ||||||| || ||||||| || | |||| || || Sbjct 463543 AGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATT 463485 Query 329 ATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGC 386 |||||| | || |||| | ||| || ||||||||| | ||| | | | ||||||| Sbjct 463484 ATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGC 463427 Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 |||| |||||||| || || |||||||||| |||||||||||||||||||||| |||||| Sbjct 463426 TGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATG 463367 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGT 505 ||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | || Sbjct 463366 CGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGC 463307 Query 506 GAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564 || || |||| |||||||||||||||||||||| | ||||||||| ||||||||||| Sbjct 463306 AAGAGGNGCACAATCGACCGATCCTGATGTCTTCNGNTGGATTTGANNNAGAGCATAGCT 463247 Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||||| |||||| | || ||| | ||| |||||| | ||||||||| ||| |||| | Sbjct 463246 GTTGGGNCCCGAANGNTGNNGAANNANGCCNGAATAGNGNGAAGCCAGANGAANCTCTNG 463187 Query 625 TGGAGGC 631 |||||| Sbjct 463186 NGGAGGC 463180 Score = 396 bits (438), Expect = 1e-107 Identities = 429/571 (75%), Gaps = 15/571 (3%) Strand=Plus/Minus Query 47 GTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCC 106 || ||| ||| ||| | || | | | |||| | ||||||| |||||||| || Sbjct 454630 GTNGTTNGGGNATGNNGNNCTNAGNNGNNNGNAAATNCCATCTAAAGNTAAATATTNGCG 454571 Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGT 166 ||| |||||||||| ||||||| |||||| ||||||||||||| |||||| |||||||| Sbjct 454570 AGANACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGN 454511 Query 167 TAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGC 226 |||||| ||||||||||||||||||||||| || | | ||||| || ||| Sbjct 454510 GAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGC 454451 Query 227 TCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGG 281 | | || ||| | | | | | ||| | ||| |||||||||||| | | Sbjct 454450 CCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTG 454394 Query 282 GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTG 341 | || ||||||| || ||||||| || | |||| || |||||||| | || Sbjct 454393 GTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG-- 454337 Query 342 GAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTT 399 |||| | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| Sbjct 454336 GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTT 454277 Query 400 GTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT 459 || || |||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 454276 ATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGNGTTTGGGN 454217 Query 460 GTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCA 517 || |||||| | ||||||||||||||||||| ||| |||| | || || || |||| | Sbjct 454216 GTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAA 454157 Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 ||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||| | | Sbjct 454156 TCGACCGATCCTGATGTCTTCGGATNNATTTGAGNAAGAGCANAGCTGTNNGGACCNGNA 454097 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAG 608 | | | ||||||||||| ||||||| |||| Sbjct 454096 ANANGNNGAACTATGCCTNAATAGGGNGAAG 454066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350