Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671895.1_202016-06- 20] 17 sequences; 12,119,261 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 416 1e-113 >seq12 Length=1077529 Score = 416 bits (460), Expect = 1e-113 Identities = 421/546 (77%), Gaps = 15/546 (3%) Strand=Plus/Minus Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 |||||| ||| || || ||||||||||||| |||| | |||||| ||||||||||| Sbjct 463730 CTAAAGNTAANNATNNGCGAGAGACCGATAGCNANCAAGNACAGTGATGGAAAGATGAAA 463671 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 || |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 463670 AGAACTTTGAAAAGAGAGNGAAAAAGNACGTGAAATTGTTGAAAGGGAAGGGCATTTGAT 463611 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA- 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 463610 CAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCAC 463554 Query 265 --GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 463553 TGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTA 463495 Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTA 380 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | | Sbjct 463494 AGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAA 463437 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 463436 GGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACG 463377 Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGA 499 ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||| Sbjct 463376 TCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGG 463317 Query 500 ACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | || || || |||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct 463316 CCTCGCAAGAGGNGCACAATCGACCGATCCTGATGTCTTCGGNTGGATTTGAGTAAGAGC 463257 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 |||| |||||||||||| || |||| ||| || |||||||||||| ||||| |||| || Sbjct 463256 ATAGNTGTTGGGACCCGNAANATGGNGAANTANGCCTGAATAGGGNGAAGCNNGAGGNAA 463197 Query 619 CTCTGG 624 || ||| Sbjct 463196 CTNTGG 463191 Score = 410 bits (454), Expect = 5e-112 Identities = 419/544 (77%), Gaps = 15/544 (3%) Strand=Plus/Minus Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 |||||||||||| || | |||||||||||||| ||||||| || ||| ||||||||||| Sbjct 454593 CTAAAGCTAAATNTTNNCGAGAGACCGATAGCGAACAAGTACAGNGATGGAAAGATGAAA 454534 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 || |||||| |||||||| |||||| ||||||||||||||||||||||| || | | Sbjct 454533 AGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGAT 454474 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA- 264 ||||| || ||| | | || ||| | | | | | ||| | ||| Sbjct 454473 CAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCAC 454417 Query 265 --GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322 |||||||||||| | || || ||||||| || ||||||| || | |||| Sbjct 454416 TGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTA 454358 Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTA 380 || |||||||| | || |||| | ||| || ||||||||| | ||| | | | | Sbjct 454357 AGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAA 454300 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||||||||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 454299 GGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACG 454240 Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGA 499 ||||||||||||||||||||| |||||| | ||||||||||||||||||| || |||| Sbjct 454239 TCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTNGGTTGGGG 454180 Query 500 ACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | || || || |||| ||||||||||| ||||||||||| ||| |||| | |||||| Sbjct 454179 CCTCGCAAGAGGNGCACAATCGACCGATCNTGATGTCTTCGNNTGGNTTTGNGNAAGAGC 454120 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 |||||||||||| ||| ||| |||| |||||| ||||||||||| |||||||| ||||| Sbjct 454119 ATAGCTGTTGGGNCCCNAAANATGGNGAACTANGCCTGAATAGGNNGAAGCCAGNGGAAA 454060 Query 619 CTCT 622 ||| Sbjct 454059 NTCT 454056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350