Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671925.1_202016-06-
20] 17 sequences; 12,115,926 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 343 6e-92
>seq12
Length=1077176
Score = 343 bits (380), Expect = 6e-92
Identities = 393/530 (74%), Gaps = 15/530 (3%)
Strand=Plus/Minus
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||| ||| || ||||| || |||| | | ||| || ||| |||||| ||||| ||||
Sbjct 463760 TAAANATTNGCGAGAGANCGNTAGCNAANANGTACAGNGATGNAAAGATNAAAAGAACTT 463701
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214
|| |||||||| |||||| ||||||||||||||||||||||| || | | ||||| |
Sbjct 463700 TGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACAT 463641
Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCA 269
| ||| | | || ||| | | | | | ||| | ||| |||||
Sbjct 463640 GGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCA 463584
Query 270 GCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTA 329
||||||| | || || ||||||| || ||||||| || | |||| || |||
Sbjct 463583 GCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTA 463525
Query 330 TAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCT 387
||||| | || |||| | ||| || ||||||||| | ||| | | | ||||||||
Sbjct 463524 TAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCT 463467
Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447
||| |||||||| || || |||||||||| |||||||||||||||||||||| |||||||
Sbjct 463466 GGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGC 463407
Query 448 GAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTG 506
|||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | ||
Sbjct 463406 GAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCNCGCA 463347
Query 507 AG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
|| || |||| ||||||||||||||| |||||||||||| |||||| ||||| ||||||
Sbjct 463346 AGAGGNGCACAATCGACCGATCCTGANGTCTTCGGATGGNTTTGAGNAAGAGNNTAGCTG 463287
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615
| || |||||||||| | | | | || || || |||||||| ||
Sbjct 463286 TNNGGNCCCGAAAGATNGNGNNCNANNCCNNAANNNGGNGAAGCCAGNGG 463237
Score = 277 bits (306), Expect = 7e-72
Identities = 360/499 (72%), Gaps = 15/499 (3%)
Strand=Plus/Minus
Query 51 TTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAG 110
|||||||| ||| || | || ||||| | |||||||||||||| || |
Sbjct 454667 TTTGGGAANNNAGCNCTNNGNNNGNGGNAAATTCNATNNNNAGCTAAATATTGGCNAGNG 454608
Query 111 ACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAA 170
|| || | ||| | || ||| ||||||||||||| |||||| |||||||| |||
Sbjct 454607 NNNNATNNCGAANAAGNACAGNGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGAAA 454548
Query 171 AAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAA 230
||| ||||||||||||||||||||||| || | | ||||| || ||| |
Sbjct 454547 AAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT- 454489
Query 231 CCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCGG 285
| || ||| | | | | | ||| | ||| |||||||||||| | || ||
Sbjct 454488 -CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTGG 454431
Query 286 TCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAAT 345
||||||| || ||||||| || | |||| || |||||||| | || ||||
Sbjct 454430 CAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAAT 454374
Query 346 GCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAA 403
| ||| || ||||||||| | ||| | | | ||||||||||| |||||||| ||
Sbjct 454373 ACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATAT 454314
Query 404 GCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCA 463
|| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 454313 GCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAA 454254
Query 464 AACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCGA 521
||||| | ||||||||||||||||||| ||| |||| | || || || || | ||||
Sbjct 454253 AACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCNCAATCGN 454194
Query 522 CCGATCCTGATGTCTTCGG 540
||||||| |||| ||| ||
Sbjct 454193 CCGATCCNGATGNCTTNGG 454175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |