Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671925.1_202016-06- 20] 17 sequences; 12,115,926 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 343 6e-92 >seq12 Length=1077176 Score = 343 bits (380), Expect = 6e-92 Identities = 393/530 (74%), Gaps = 15/530 (3%) Strand=Plus/Minus Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||| ||| || ||||| || |||| | | ||| || ||| |||||| ||||| |||| Sbjct 463760 TAAANATTNGCGAGAGANCGNTAGCNAANANGTACAGNGATGNAAAGATNAAAAGAACTT 463701 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 || |||||||| |||||| ||||||||||||||||||||||| || | | ||||| | Sbjct 463700 TGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACAT 463641 Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCA 269 | ||| | | || ||| | | | | | ||| | ||| ||||| Sbjct 463640 GGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCA 463584 Query 270 GCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTA 329 ||||||| | || || ||||||| || ||||||| || | |||| || ||| Sbjct 463583 GCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTA 463525 Query 330 TAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCT 387 ||||| | || |||| | ||| || ||||||||| | ||| | | | |||||||| Sbjct 463524 TAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCT 463467 Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447 ||| |||||||| || || |||||||||| |||||||||||||||||||||| ||||||| Sbjct 463466 GGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGC 463407 Query 448 GAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTG 506 |||||||||||||| |||||| | ||||||||||||||||||| ||| |||| | || Sbjct 463406 GAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCNCGCA 463347 Query 507 AG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 || || |||| ||||||||||||||| |||||||||||| |||||| ||||| |||||| Sbjct 463346 AGAGGNGCACAATCGACCGATCCTGANGTCTTCGGATGGNTTTGAGNAAGAGNNTAGCTG 463287 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615 | || |||||||||| | | | | || || || |||||||| || Sbjct 463286 TNNGGNCCCGAAAGATNGNGNNCNANNCCNNAANNNGGNGAAGCCAGNGG 463237 Score = 277 bits (306), Expect = 7e-72 Identities = 360/499 (72%), Gaps = 15/499 (3%) Strand=Plus/Minus Query 51 TTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAG 110 |||||||| ||| || | || ||||| | |||||||||||||| || | Sbjct 454667 TTTGGGAANNNAGCNCTNNGNNNGNGGNAAATTCNATNNNNAGCTAAATATTGGCNAGNG 454608 Query 111 ACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAA 170 || || | ||| | || ||| ||||||||||||| |||||| |||||||| ||| Sbjct 454607 NNNNATNNCGAANAAGNACAGNGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGAAA 454548 Query 171 AAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAA 230 ||| ||||||||||||||||||||||| || | | ||||| || ||| | Sbjct 454547 AAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT- 454489 Query 231 CCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCGG 285 | || ||| | | | | | ||| | ||| |||||||||||| | || || Sbjct 454488 -CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTGG 454431 Query 286 TCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAAT 345 ||||||| || ||||||| || | |||| || |||||||| | || |||| Sbjct 454430 CAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAAT 454374 Query 346 GCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAA 403 | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| || Sbjct 454373 ACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATAT 454314 Query 404 GCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCA 463 || |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 454313 GCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAA 454254 Query 464 AACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCGA 521 ||||| | ||||||||||||||||||| ||| |||| | || || || || | |||| Sbjct 454253 AACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCNCAATCGN 454194 Query 522 CCGATCCTGATGTCTTCGG 540 ||||||| |||| ||| || Sbjct 454193 CCGATCCNGATGNCTTNGG 454175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350