Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671955.1_202016-06- 20] 17 sequences; 12,126,899 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 381 2e-103 >seq12 Length=1077803 Score = 381 bits (422), Expect = 2e-103 Identities = 400/521 (77%), Gaps = 15/521 (3%) Strand=Plus/Minus Query 67 TAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAG 126 ||| |||| ||||||| | |||||| |||||||||||| |||||||||||||| ||||| Sbjct 454874 TAAGTGGGNNGTAAATTCCATCTAAANCTAAATATTGGCGAGAGACCGATAGCGAACAAG 454815 Query 127 TAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGT 186 || |||||| ||||||||||||| |||||| |||||||| |||||| |||||||||||| Sbjct 454814 TACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGT 454755 Query 187 TGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG- 245 ||||||||||| || | | ||||| || ||| | | || ||| | | Sbjct 454754 TGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGT 454697 Query 246 -GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCG 301 | | | ||| | ||| |||||||||||| | || || ||||||| || Sbjct 454696 AGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATA 454639 Query 302 GGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACT 361 ||||||| || | |||| || |||||||| | || |||| | ||| || ||||| Sbjct 454638 GGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACT 454581 Query 362 GAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAA 419 |||| | ||| | | | ||||||||||| |||||||| || || |||||||||| || Sbjct 454580 GAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAA 454521 Query 420 CACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAAT 479 |||||||||||||||||||| ||||||||||||||||||||| |||||| | |||||||| Sbjct 454520 CACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAAT 454461 Query 480 GAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTT 537 ||||||||||| ||| |||| | || || || |||| |||| ||||||||||||| | Sbjct 454460 GAAAGTGAACGTAGGTTGGGGCCTCGNAAGAGGNGCACAATCGNCCGATCCTGATGTNTN 454401 Query 538 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAA 578 |||| ||||||||||||| ||| |||||||| | | |||| Sbjct 454400 CGGANGGATTTGAGTAAGNGCANAGCTGTTGNGNNCNGAAA 454360 Score = 347 bits (384), Expect = 5e-93 Identities = 407/555 (73%), Gaps = 15/555 (3%) Strand=Plus/Minus Query 50 GTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGA 109 ||| || || | ||||| | | |||| || ||||| ||| || ||| ||| Sbjct 464028 GTTNGGNAANNNANCTCTANNNNGNNGNNAAATNCNNTCNAAAGCNAAANATNGGCGAGA 463969 Query 110 GACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAA 169 ||||||||||| ||||||| || ||| ||||||||||||| |||||| |||||||| || Sbjct 463968 GACCGATAGCGAACAAGTANAGNGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGAA 463909 Query 170 AAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCA 229 |||| ||||||||||||||||||||||| || | | ||||| || ||| | Sbjct 463908 AAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT 463849 Query 230 ACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCG 284 | || ||| | | | | | ||| | ||| |||||||||||| | || | Sbjct 463848 --CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTG 463792 Query 285 GTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAA 344 | ||||||| || ||||||| || | |||| || |||||||| | || ||| Sbjct 463791 GCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAA 463735 Query 345 TGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTA 402 | | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| || Sbjct 463734 TACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATA 463675 Query 403 AGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC 462 || |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 463674 TGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTA 463615 Query 463 AAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCG 520 |||||| | ||||||||||||||||||| ||| |||| | || || || |||| | || Sbjct 463614 AAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACAANCG 463555 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 |||||||||||||||||||||||||| || | || || | | || | ||| | || ||| Sbjct 463554 ACCGATCCTGATGTCTTCGGATGGATNTGNGNAANAGNANANCTNTNGGGNCNCGNAAGN 463495 Query 581 TGGTGAACTATGCCT 595 | | || ||||| Sbjct 463494 NNGNNANCTNTGCCT 463480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350