Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671985.1_202016-06- 20] 17 sequences; 12,133,991 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq12 376 5e-102 >seq12 Length=1077615 Score = 376 bits (416), Expect = 5e-102 Identities = 269/305 (88%), Gaps = 6/305 (2%) Strand=Plus/Minus Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74 |||||||||||||||| | || | |||| ||| | | || || ||||||||| Sbjct 465998 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGCGAACCAGGACTT 465943 Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGA 133 |||||||||||||||||||| ||||||||||||| | ||||||||||| ||||||||||| Sbjct 465942 TTACTTTGAAAAAATTAGAGNGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGA 465883 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 465882 ATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAA 465823 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 465822 TAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 465763 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||| Sbjct 465762 AGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTT 465704 Query 314 AGGGG 318 ||||| Sbjct 465703 AGGGG 465699 Score = 372 bits (412), Expect = 6e-101 Identities = 268/305 (88%), Gaps = 6/305 (2%) Strand=Plus/Minus Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74 |||||||||||||||| | || | |||| ||| | | || || ||||||||| Sbjct 456861 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGCGAACCAGGACTT 456806 Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGA 133 |||||||||||||||||||| ||||||||||||| | ||||||||||| ||||||||||| Sbjct 456805 TTACTTTGAAAAAATTAGAGNGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGA 456746 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 456745 ATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAA 456686 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 456685 TAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGNGAAATTCTTGGATTTATTGA 456626 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||| Sbjct 456625 AGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTT 456567 Query 314 AGGGG 318 ||||| Sbjct 456566 AGGGG 456562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199844416