Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671985.1_202016-06- 20] 17 sequences; 12,133,991 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 367 5e-99 >seq12 Length=1077615 Score = 367 bits (406), Expect = 5e-99 Identities = 405/540 (75%), Gaps = 15/540 (3%) Strand=Plus/Minus Query 72 GGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAG 131 ||| || ||| | | | ||||||||| |||||| || ||||||||| | ||||| | || Sbjct 463836 GGGNGGNAAANTCCATNNAAAGCTAAANATTGGCGAGNGACCGATAGNGAACAAGNACAG 463777 Query 132 TGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAA 191 ||| ||||||||||||| |||||| |||||||| |||||| ||||||||||||||||| Sbjct 463776 NGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGNGAAAAAGTACGTGAAATTGTTGAAA 463717 Query 192 GGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGC 249 |||||| || | | ||||| || ||| | | || ||| | | | | Sbjct 463716 GGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGG 463659 Query 250 ACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAAT 306 | ||| | ||| |||||||||||| | || || ||||||| || ||||| Sbjct 463658 AATCT-CGCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAAT 463601 Query 307 GTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGT 366 || || | |||| || |||||||| | || |||| | ||| || ||||||||| Sbjct 463600 GTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGA 463543 Query 367 CCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGG 424 | ||| | | | ||||||||||| |||||||| || || |||||||||| ||||||| Sbjct 463542 CTGCGACGTAAGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGG 463483 Query 425 ACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAG 484 ||||||||||||||| ||||||||||||||||||||| |||||| | ||||||||||||| Sbjct 463482 ACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAG 463423 Query 485 TGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGAT 542 |||||| ||| |||| | || || || |||| |||| ||||||||||| ||||| | Sbjct 463422 TGAACGTAGGTTGGGGCCTCGCAAGAGGNGCACNATCGNNCGATCCTGATGNNTTCGGNT 463363 Query 543 GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGG 602 ||||||| ||||| | ||||||||||| |||||| ||||| ||||| | | || | || Sbjct 463362 GGATTTGNGTAAGNGNATAGCTGTTGGNACCCGANNGATGGNGAACTNNGNCNGANTNGG 463303 Score = 316 bits (350), Expect = 8e-84 Identities = 372/501 (74%), Gaps = 15/501 (3%) Strand=Plus/Minus Query 47 GTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCC 106 ||||||||||| | | |||| | | | || || | | |||||||||||||||||| Sbjct 454724 GTTGTTTGGGANNGNANCTCTNAGNGNGNGGNAANNTCCANCTAAAGCTAAATATTGGCG 454665 Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGT 166 |||||||||||||| ||||||| |||||| ||||||||||||| |||||| |||||||| Sbjct 454664 AGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGN 454605 Query 167 TAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGC 226 |||||| ||||||||||||||||||||||| || | | ||||| || ||| Sbjct 454604 GAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGC 454545 Query 227 TCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCGGTCA---GGCCAGCATCAGCTCGG 281 | | || ||| | | | | | ||| | ||| |||||||||||| | | Sbjct 454544 CCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCATTTCACTGGGCCAGCATCAGTTTTG 454488 Query 282 GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTG 341 | || ||||||| || ||||||| || | |||| || |||||||| | || Sbjct 454487 GTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAGTATTATAGCCTGTGG-- 454431 Query 342 GAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTT 399 |||| | ||| || ||||||||| | ||| | | | ||||||||||| |||||||| Sbjct 454430 GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGTT 454371 Query 400 GTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT 459 || || |||||||||| |||||||||||||||||||||| |||||||||| |||||||| Sbjct 454370 ATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGNGTTTGGGT 454311 Query 460 GTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG-TGGGAACCCGTGAG-GGTGCACCA 517 || |||||| | ||||||||||||||||||| ||| |||| | || || || || | | Sbjct 454310 GTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGNGCNCAA 454251 Query 518 TCGACCGATCCTGATGTCTTC 538 | ||||| | | || |||| Sbjct 454250 TNGACCGNTNCNGANNNCTTC 454230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350