Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737175.1_202016-09- 21] 1,050 sequences; 12,822,094 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 668 0.0 seq155 178 5e-42 >seq12 Length=1066807 Score = 668 bits (740), Expect = 0.0 Identities = 556/670 (83%), Gaps = 15/670 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 462408 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 462349 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 462348 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 462289 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || | Sbjct 462288 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 462229 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCG 260 | ||||| || ||| | | || ||| | | | | | ||| | Sbjct 462228 TTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCAT 462172 Query 261 GTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 ||| |||||||||||| | || || ||||||| || ||||||| || | | Sbjct 462171 TTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCT 462113 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCC 375 ||| || |||||||| | || |||| | ||| || ||||||||| | ||| | Sbjct 462112 CGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAA 462055 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | | ||||||||||| |||||||| || || |||||||||| |||||||||||||||||| Sbjct 462054 GTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTC 461995 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 |||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| Sbjct 461994 TAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGT 461935 Query 496 GGGAACC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 || || || || ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 461934 TGGGGCCTCGCAAGAGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 461875 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 461874 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 461815 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||| Sbjct 461814 GGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGT 461755 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 461754 ATAGGGGCGA 461745 >seq155 Length=928 Score = 178 bits (196), Expect = 5e-42 Identities = 125/140 (89%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTC-GACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAA 81 ||||| || ||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 139 TGTGAGGC-CCTTCTGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAA 81 Query 82 TTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 141 || | ||||| ||||||||||||| |||||||||||||| ||||||| |||| ||||| Sbjct 80 TTACATCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAG 21 Query 142 ATGAAAAGCACTTTGGAAAG 161 ||||||||||||||| |||| Sbjct 20 ATGAAAAGCACTTTGAAAAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079977477500