Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737505.2_202016-11-
09] 169 sequences; 12,104,055 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq12 643 0.0
seq35 205 3e-50
>seq12
Length=1056709
Score = 643 bits (712), Expect = 0.0
Identities = 465/541 (86%), Gaps = 46/541 (9%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 440050 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 440109
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 440110 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 440169
Query 127 GGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183
|||| |||| ||||||| || || |||| ||| |||| |||| ||||||||||
Sbjct 440170 AGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCAT 440228
Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243
||| |||||||| |||| |||| ||||||||||||||||| |||||||| ||||||||
Sbjct 440229 TGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCAC 440285
Query 244 TTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
|||||||||| ||||| | ||| ||||||| ||| |||||||||||||||||||||||
Sbjct 440286 TTATTCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGT 440344
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 440345 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 440404
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
|||||||||||||||||||||||||||||||
Sbjct 440405 GATAGGGACAGTGGGAATCTCGTTAATCCAT----------------------------- 440435
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440436 --------TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 440487
Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440488 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 440547
Query 543 G 543
|
Sbjct 440548 G 440548
Score = 143 bits (158), Expect = 9e-32
Identities = 88/94 (94%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 477847 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 477906
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100
||||||||||||||||||||||||||||||| ||
Sbjct 477907 GTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 477940
Score = 141 bits (156), Expect = 3e-31
Identities = 86/91 (95%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 449017 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 449076
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97
|||||||||||||||||||||||||||||||
Sbjct 449077 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 449107
>seq35
Length=468
Score = 205 bits (226), Expect = 3e-50
Identities = 113/113 (100%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 431 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC 60
Query 491 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635197236512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |